Evidence map›Paper›PMID 36926695›Full record

ArticleBiophysical journal2023

The stress-free state of human erythrocytes: Data-driven inference of a transferable RBC model.

Lucas Amoudruz, Athena Economides, Georgios Arampatzis, Petros Koumoutsakos

Abstract read
In one paragraph

Article in Biophysical journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lucas AmoudruzComputational Science and Engineering Laboratory, ETH Zürich, Zürich, Switzerland; School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts.
Athena EconomidesComputational Science and Engineering Laboratory, ETH Zürich, Zürich, Switzerland; School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts.
Georgios ArampatzisComputational Science and Engineering Laboratory, ETH Zürich, Zürich, Switzerland; School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts.
Petros KoumoutsakosComputational Science and Engineering Laboratory, ETH Zürich, Zürich, Switzerland; School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts. Electronic address: petros@seas.harvard.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The stress-free state (SFS) of red blood cells (RBCs) is a fundamental reference configuration for the calibration of computational models, yet it remains unknown. Current experimental methods cannot measure the SFS of cells without affecting their mechanical properties, whereas computational postulates are the subject of controversial discussions. Here, we introduce data-driven estimates of the SFS shape and the visco-elastic properties of RBCs. We employ data from single-cell experiments that include measurements of the equilibrium shape of stretched cells and relaxation times of initially stretched RBCs. A hierarchical Bayesian model accounts for these experimental and data heterogeneities. We quantify, for the first time, the SFS of RBCs and use it to introduce a transferable RBC (t-RBC) model. The effectiveness of the proposed model is shown on predictions of unseen experimental conditions during the inference, including the critical stress of transitions between tumbling and tank-treading cells in shear flow. Our findings demonstrate that the proposed t-RBC model provides predictions of blood flows with unprecedented accuracy and quantified uncertainties.

Indexed as

ErythrocytesBayes TheoremComputer SimulationHumansViscosity

Identifiers

PMID36926695
PMCPMC10147838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.