Evidence map›Paper›PMID 36926543›Full record

ArticleFrontiers in network physiology2023

Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model.

Joseph K Hall, Jason H T Bates, Dylan T Casey, Erzsébet Bartolák-Suki, Kenneth R Lutchen, Béla Suki

Open access · goldFull text read
In one paragraph

Article in Frontiers in network physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Mechanobiology and Resolution of Lung Fibrosis.Annual review of physiology · 2026
    Review
  2. Article
  3. Network-Associated Mechanotransduction in Health and Disease.Results and problems in cell differentiation · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Joseph K HallDepartment of Biomedical Engineering, Boston University, Boston, MA, United States.
Jason H T BatesDepartment of Medicine, University of Vermont, Burlington, VT, United States.
Dylan T CaseyComplex Systems Center, University of Vermont, Burlington, VT, United States.
Erzsébet Bartolák-SukiDepartment of Biomedical Engineering, Boston University, Boston, MA, United States.
Kenneth R LutchenDepartment of Biomedical Engineering, Boston University, Boston, MA, United States.
Béla SukiDepartment of Biomedical Engineering, Boston University, Boston, MA, United States.
Boston University · USUniversity of Vermont · US

Funding

Multidisciplinary Training in Lung BiologyT32HL076122 · NHLBI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI IRVIN, CHARLES G, POYNTER, MATTHEW E · 2004 to 2023
$6.1M
A multi-scale computational model of the extracellular matrix of the lungU01HL139466 · NHLBI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI SUKI, BELA · 2018 to 2022
$3.9M
NHLBI NIH HHS T32 HL076122NHLBI NIH HHS U01 HL139466
6 · The paper itself

Abstract

Pulmonary Fibrosis (PF) is a deadly disease that has limited treatment options and is caused by excessive deposition and cross-linking of collagen leading to stiffening of the lung parenchyma. The link between lung structure and function in PF remains poorly understood, although its spatially heterogeneous nature has important implications for alveolar ventilation. Computational models of lung parenchyma utilize uniform arrays of space-filling shapes to represent individual alveoli, but have inherent anisotropy, whereas actual lung tissue is isotropic on average. We developed a novel Voronoi-based 3D spring network model of the lung parenchyma, the Amorphous Network, that exhibits more 2D and 3D similarity to lung geometry than regular polyhedral networks. In contrast to regular networks that show anisotropic force transmission, the structural randomness in the Amorphous Network dissipates this anisotropy with important implications for mechanotransduction. We then added agents to the network that were allowed to carry out a random walk to mimic the migratory behavior of fibroblasts. To model progressive fibrosis, agents were moved around the network and increased the stiffness of springs along their path. Agents migrated at various path lengths until a certain percentage of the network was stiffened. Alveolar ventilation heterogeneity increased with both percent of the network stiffened, and walk length of the agents, until the percolation threshold was reached. The bulk modulus of the network also increased with both percent of network stiffened and path length. This model thus represents a step forward in the creation of physiologically accurate computational models of lung tissue disease.

Indexed as

bulk modulusforce transmissionisotropypercolationrandom networksstiffness

Identifiers

PMID36926543
PMCPMC10013074
OpenAlexW4319795134

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read1
measurements read37
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.