Evidence map›Paper›PMID 36922633›Full record

SynthesisEuropean journal of human genetics : EJHG2024

Genome-wide meta-analysis identifies novel loci conferring risk of acne vulgaris.

Maris Teder-Laving, Mart Kals, Anu Reigo, Riin Ehin, Telver Objärtel, Mariliis Vaht, Tiit Nikopensius, Andres Metspalu, Külli Kingo

Erratum issuedOpen access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in European journal of human genetics : EJHG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Hidden immune memory niches in inflammatory skin diseases.bioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Review
  6. Review
  7. A New Insight into Acne Pathogenesis: Multi-Omics Links a Metabolite toClinical, cosmetic and investigational dermatology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genomic technologies identify milder presentations of Mendelian disease.European journal of human genetics : EJHG · 2024
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Maris Teder-Laving *Estonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia. maris.teder-laving@ut.ee.ORCID 0000-0002-5872-1850
Mart Kals *Estonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.ORCID 0000-0003-2090-8780
Anu ReigoEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.
Riin EhinEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.
Telver ObjärtelEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.ORCID 0000-0002-0079-8775
Mariliis VahtEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.
Tiit NikopensiusEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.
Andres MetspaluEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, Estonia.ORCID 0000-0002-3718-796X
Külli KingoFaculty of Medicine, Institute of Clinical Medicine, University of Tartu, Tartu, Estonia.
University of Tartu · EETallinn University of Technology · EETartu University Hospital · EEUniversity of Helsinki · FI

Funding

EC | European Regional Development Fund (Europski Fond za Regionalni Razvoj) 2014-2020.4.01.15-0012EC | European Regional Development Fund (Europski Fond za Regionalni Razvoj) 2014-2020.4.01.16012Eesti Teadusagentuur (Estonian Research Council) PRG1189
6 · The paper itself

Abstract

Acne vulgaris is a common chronic skin disorder presenting with comedones, cystic structures forming within the distal hair follicle, and in most cases additionally with inflammatory skin lesions on the face and upper torso. We performed a genome-wide association study and meta-analysis of data from 34,422 individuals with acne and 364,991 controls from three independent European-ancestry cohorts. We replicated 19 previously implicated genome-wide significant risk loci and identified four novel loci [11q12.2 (FADS2), 12q21.1 (LGR5), 17q25.3 (FASN), and 22q12.1 (ZNRF3-KREMEN1)], bringing the total number of reported acne risk loci to 50. Our meta-analysis results explain 9.4% of the phenotypic variance of acne. A polygenic model of acne risk variants showed that individuals in the top 5% of the risk percentiles had a 1.62-fold (95% CI 1.47-1.78) increased acne risk relative to individuals with average risk (20-80% on the polygenic risk score distribution). Our findings highlight the Wnt and MAPK pathways as key factors in the genetic predisposition to acne vulgaris, together with the effects of genetic variation on the structure and maintenance of the hair follicle and pilosebaceous unit. Two novel loci, 11q12.2 and 17q25.3, contain genes encoding key enzymes involved in lipid biosynthesis pathways.

Indexed as

Acne VulgarisGenome-Wide Association StudyFemaleGenetic LociGenetic Predisposition to DiseaseHumansMaleMultifactorial InheritancePolymorphism, Single Nucleotide

Identifiers

PMID36922633
PMCPMC11368920
OpenAlexW4327616141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.