Evidence map›Paper›PMID 36922625›Full record

ArticleLeukemia2023

Impact of U2AF1 mutations on circular RNA expression in myelodysplastic neoplasms.

Eileen Wedge, Ulvi Ahmadov, Thomas B Hansen, Zongliang Gao, Morten Tulstrup, Christophe Côme, Sridhar Nonavinkere Srivatsan, Tanzir Ahmed, Jakob S Jespersen, Balthasar C Schlotmann and 8 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Circular RNA in cancer.Nature reviews. Cancer · 2024
    Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Eileen WedgeDepartment of Hematology, Copenhagen University Hospital, Copenhagen, Denmark.
Ulvi AhmadovDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.
Thomas B HansenDepartment of Molecular Biology and Genetics, Aarhus, Denmark.
Zongliang GaoDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.
Morten TulstrupDepartment of Hematology, Copenhagen University Hospital, Copenhagen, Denmark.ORCID 0000-0002-7444-7652
Christophe CômeBiotech Research and Innovation Center (BRIC), University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0001-5229-4440
Sridhar Nonavinkere SrivatsanDivision of Oncology, Washington University School of Medicine, St Louis, MO, USA.
Tanzir AhmedDivision of Oncology, Washington University School of Medicine, St Louis, MO, USA.
Jakob S JespersenBiotech Research and Innovation Center (BRIC), University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-4930-5900
Balthasar C SchlotmannBiotech Research and Innovation Center (BRIC), University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-8137-544X
Claudia SchöllkopfDepartment of Hematology, Copenhagen University Hospital, Copenhagen, Denmark.
Klas Raaschou-JensenDepartment of Hematology, Odense University Hospital, Odense, Denmark.
Niels ØdumDepartment of Immunology and Microbiology, University of Copenhagen, Copenhagen, Denmark.
Jørgen KjemsDepartment of Molecular Biology and Genetics, Aarhus, Denmark.
Rasmus O BakDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.ORCID 0000-0002-7383-0297
Matthew J WalterDivision of Oncology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-7753-1091
Kirsten Grønbæk *Department of Hematology, Copenhagen University Hospital, Copenhagen, Denmark. kirsten.groenbaek@regionh.dk.ORCID 0000-0002-1535-9601
Lasse S Kristensen *Department of Biomedicine, Aarhus University, Aarhus, Denmark. lasse@biomed.au.dk.ORCID 0000-0002-5980-7939
University of Copenhagen · DKAarhus University · DKWashington University in St. Louis · USCopenhagen University Hospital · DKOdense University Hospital · DK

Funding

Targeting the Bone Marrow Microenvironment In Acute Lymphocytic LeukemiaP50CA171963 · NCI · WASHINGTON UNIVERSITY · PI Daniel C Link · 2013 to 2026
$31.6M
LLS 7024-21NIH HHS P50CA171963
6 · The paper itself

Abstract

Mutations in U2AF1 are relatively common in myelodysplastic neoplasms (MDS) and are associated with an inferior prognosis, but the molecular mechanisms underlying this are not fully elucidated. Circular RNAs (circRNAs) have been implicated in cancer, but it is unknown how mutations in splicing factors may impact on circRNA biogenesis. Here, we used RNA-sequencing to investigate the effects of U2AF1 mutations on circRNA expression in K562 cells with a doxycycline-inducible U2AF1

Indexed as

Myelodysplastic SyndromesNeoplasmsAnimalsDoxycyclineMiceMutationRNA, CircularRNA SplicingRNA Splicing FactorsSplicing Factor U2AFDoxycyclineRNA, CircularRNA Splicing FactorsSplicing Factor U2AF

Identifiers

PMID36922625
OpenAlexW4327681711

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.