Evidence map›Paper›PMID 36920204›Full record

ArticleJournal of bacteriology2023

DksA, ppGpp, and RegAB Regulate Nitrate Respiration in Paracoccus denitrificans.

Ashvini Ray, Stephen Spiro

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 12 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ashvini RayDepartment of Biological Sciences, University of Texas at Dallas, Richardson, Texas, USA.
Stephen SpiroDepartment of Biological Sciences, University of Texas at Dallas, Richardson, Texas, USA.ORCID 0000-0001-5975-9984
The University of Texas at Dallas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The periplasmic (NAP) and membrane-associated (Nar) nitrate reductases of Paracoccus denitrificans are responsible for nitrate reduction under aerobic and anaerobic conditions, respectively. Expression of NAP is elevated in cells grown on a relatively reduced carbon and energy source (such as butyrate); it is believed that NAP contributes to redox homeostasis by coupling nitrate reduction to the disposal of excess reducing equivalents. Here, we show that deletion of either

Indexed as

NitratesParacoccus denitrificansButyratesGuanosine TetraphosphateNitrate ReductaseNitrate ReductasesNitric OxideNitrous OxideRespirationButyratesGuanosine TetraphosphateNitrate ReductaseNitrate ReductasesNitratesNitric OxideNitrous OxideDksAguanosine tetraphosphatenitrate respirationParacoccus denitrificansredox homeostasisRegAB

Identifiers

PMID36920204
PMCPMC10127633
OpenAlexW4324311620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.