Evidence map›Paper›PMID 36918441›Full record

ArticleWorld journal of microbiology & biotechnology2023

Comparison of ion selectivities of nitrite channel NirC and water channel aquaporin.

Hilal Yılmaz, Esra Meşe Erdoğan, Pınar Ergenekon, Melek Özkan

Abstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Microbial membrane transport proteins and their biotechnological applications.World journal of microbiology & biotechnology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hilal YılmazEnvironmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-5782-0283
Esra Meşe ErdoğanEnvironmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey.ORCID http://orcid.org/0000-0001-7425-2399
Pınar ErgenekonEnvironmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-0555-5932
Melek ÖzkanEnvironmental Engineering Department, Gebze Technical University, 41400, Kocaeli, Turkey. mozkan@gtu.edu.tr.ORCID http://orcid.org/0000-0001-9017-5389
Gebze Technical University · TR

Funding

Scientific and Technological Research Council of Türkiye TUBITAK 120Z412
6 · The paper itself

Abstract

nirC gene coding for the nitrite channel of E. coli K12 was cloned into the pET28a vector and expressed in E. coli BL21 cells. 28.5 kDa NirC monomer was purified from membrane components of E. coli. Selectivity of NirC for different ions including nitrite, nitrate, sulfate, formate, and acetate anions, and a divalent cation, magnesium, was compared with that of bacterial aquaporin from Halomonas elongata. Water and ion permeability values were determined by measuring the light scattering rates of proteoliposomes containing NirC and aquaporins during their water loss and gain. NirC shows a selective permeability to nitrite and is more resistant to the entry of other anions as compared to aquaporin. The single channel permeability of NirC for nitrite is about 10-fold that of a single aquaporin channel. Both aquaporin and NirC channel proteins were impermeable to MgCl

Indexed as

AquaporinsEscherichia coli ProteinsAnionsAnion Transport ProteinsEscherichia coliNitritesWaterAnionsAnion Transport ProteinsAquaporinsEscherichia coli ProteinsNirC protein, E coliNitritesWaterE. coliMolecular dockingNirCNitrite channel

Identifiers

PMID36918441
OpenAlexW4324304767

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.