Evidence map›Paper›PMID 36917008›Full record

ArticleThe Journal of experimental medicine2023

A neomorphic mutation in the interferon activation domain of IRF4 causes a dominant primary immunodeficiency.

Romane Thouenon, Loïc Chentout, Nidia Moreno-Corona, Lucie Poggi, Emilia Puig Lombardi, Benedicte Hoareau, Yohann Schmitt, Chantal Lagresle-Peyrou, Jacinta Bustamante, Isabelle André and 7 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Tumor-driven stabilization of CD8Frontiers in immunology · 2026
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  5. Human genetics of Whipple's disease.Current opinion in rheumatology · 2025
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  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Romane ThouenonUniversité Paris Cité , Paris, France.ORCID 0000-0003-4602-5388
Loïc ChentoutUniversité Paris Cité , Paris, France.ORCID 0000-0002-7061-3334
Nidia Moreno-CoronaUniversité Paris Cité , Paris, France.ORCID 0000-0001-5248-0454
Lucie PoggiUniversité Paris Cité , Paris, France.ORCID 0000-0002-8229-2339
Emilia Puig LombardiUniversité de Paris, Bioinformatics Core Facility, Imagine Institute, INSERM UMR 1163 , Paris, France.ORCID 0000-0001-6387-8740
Benedicte HoareauSorbonne Université , UMS037, PASS, Plateforme de Cytométrie de la Pitié-Salpêtrière , Paris, France.ORCID 0000-0002-6575-7085
Yohann SchmittPlateforme de génomique, Institut Imagine-Structure Fédérative de Recherche Necker, INSERM U1163 et INSERM US24/CNRS UMS3633, Université de Paris , Paris, France.ORCID 0000-0001-7267-9225
Chantal Lagresle-PeyrouUniversité Paris Cité , Paris, France.ORCID 0000-0002-2216-6453
Jacinta BustamanteSt. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University , New York, NY, USA.ORCID 0000-0002-3439-2482
Isabelle AndréUniversité Paris Cité , Paris, France.ORCID 0000-0002-3905-9910
Marina CavazzanaUniversité Paris Cité , Paris, France.ORCID 0000-0002-0264-0891
Anne DurandyLaboratory of Human Lymphohematopoiesis, Imagine Institute, INSERM UMR 1163 , Paris, France.ORCID 0000-0001-7706-8466
Jean-Laurent CasanovaSt. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University , New York, NY, USA.ORCID 0000-0002-7782-4169
Lionel GalicierClinical Immunology Department, Hôpital Saint Louis, Université de Paris , Paris, France.ORCID 0000-0002-0360-7620
Jehane FadlallahClinical Immunology Department, Hôpital Saint Louis, Université de Paris , Paris, France.ORCID 0000-0003-3064-9401
Alain FischerImagine Institute, INSERM UMR 1163 , Paris, France.ORCID 0000-0003-4025-5983
Sven KrackerUniversité Paris Cité , Paris, France.ORCID 0000-0003-4543-8236
Inserm · FRUniversité Paris Cité · FRCentre National de la Recherche Scientifique · FRHôpital Necker-Enfants Malades · FRHoward Hughes Medical Institute · USSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we report on a heterozygous interferon regulatory factor 4 (IRF4) missense variant identified in three patients from a multigeneration family with hypogammaglobulinemia. Patients' low blood plasmablast/plasma cell and naïve CD4 and CD8 T cell counts contrasted with high terminal effector CD4 and CD8 T cell counts. Expression of the mutant IRF4 protein in control lymphoblastoid B cell lines reduced the expression of BLIMP-1 and XBP1 (key transcription factors in plasma cell differentiation). In B cell lines, the mutant IRF4 protein as wildtype was found to bind to known IRF4 binding motifs. The mutant IRF4 failed to efficiently regulate the transcriptional activity of interferon-stimulated response elements (ISREs). Rapid immunoprecipitation mass spectrometry of endogenous proteins indicated that the mutant and wildtype IRF4 proteins differed with regard to their respective sets of binding partners. Our findings highlight a novel mechanism for autosomal-dominant primary immunodeficiency through altered protein binding by mutant IRF4 at ISRE, leading to defective plasma cell differentiation.

Indexed as

B-LymphocytesInterferon Regulatory FactorsCell DifferentiationHumansInterferon Regulatory Factor-4MutationPlasma CellsInterferon Regulatory Factor-4Interferon Regulatory Factors

Identifiers

PMID36917008
PMCPMC10037104
OpenAlexW4324129706

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.