Evidence map›Paper›PMID 36916770›Full record

ArticleJournal of clinical laboratory analysis2023

Rapid two-stage amplification in a single tube for simultaneous detection of norovirus GII and group a rotavirus.

Feng-Yu Li, Ying-Hui Guo, Zhen-Lu Sun, Hong Liu, Meng-Chuan Zhao, Jia Cui, Yue Jiang, Xin-Xin Shen, Xue-Jun Ma, Zhi-Shan Feng

Abstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Rapid and sensitive identification ofFrontiers in cellular and infection microbiology · 2025
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Feng-Yu LiHebei Medical University, Shijiazhuang, Hebei, China.ORCID https://orcid.org/0000-0001-7327-3040
Ying-Hui GuoDepartment of Clinical Laboratory, Children's Hospital of Hebei Province, Shijiazhuang, Hebei, China.
Zhen-Lu SunNHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Hong LiuShandong Provincial Research Center for Bioinformatic Engineering and Technique, School of Life Sciences and Medicine, Shandong University of Technology, Zibo, Shandong, China.
Meng-Chuan ZhaoDepartment of Clinical Laboratory, Children's Hospital of Hebei Province, Shijiazhuang, Hebei, China.
Jia CuiHebei General Hospital, Shijiazhuang, Hebei, China.
Yue JiangThe Third Hospital of Hebei Medical University, Shijiazhuang City, Hebei Province, China.
Xin-Xin ShenNHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Xue-Jun MaNHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.ORCID https://orcid.org/0000-0001-5891-5260
Zhi-Shan FengHebei Medical University, Shijiazhuang, Hebei, China.

Funding

National Key R&D Program of China 2021YFC2301102National Natural Science Foundation of China 82202593Natural Science Foundation of Shandong Province, China ZR2022MH115the Central Guidance on Local Science and Technology Development Fund of Hebei Province 216Z7713Gthe key R&D projects in Zibo city 2020kj100011
6 · The paper itself

Abstract

The most prevalent viruses currently causing diarrhea are norovirus and rotavirus, and rapid and sensitive detection methods are essential for the early diagnosis of disease. The purpose of this study was to establish a sensitive single-tube two-stage nucleic acid amplification method-reverse transcription recombinase-assisted PCR (RT-RAP)-for simultaneous detection of norovirus GII and group A Rotavirus, with the first stage consisting of isothermal reverse transcription recombinase-aided amplification (RT-RAA) and the second stage consisting of qPCR (quantitative PCR). RT-RAP is more sensitive than either RT-RAA or qRT-PCR (quantitative RT-PCR) alone. And the addition of a barrier that can be disassembled after heating enabled the detection of samples within 1 h in a single closed tube. Sensitivity was 10 copies/reaction of norovirus (Novs) GII and group A rotavirus (RVA). In parallel, two hundred fecal specimens were used to evaluate the method and compare it with a commercial fluorescent quantitative RT-PCR. The data showed kappa values of 0.957 and 0.98 (p < 0.05) for detecting Novs GII and RVA by the two methods, indicating the potential of the newly established assay to be applied to clinical and laboratory testing.

Indexed as

Caliciviridae InfectionsGastroenteritisNorovirusRotavirusFecesHumansRecombinasesSensitivity and SpecificityRecombinasesgroup A rotavirusnorovirus GIIrapid detectionRT-RAA (reverse transcription recombinase-aided amplification)

Identifiers

PMID36916770
PMCPMC10098066

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.