Evidence map›Paper›PMID 36916511›Full record

ArticleThe Plant cell2023

The ethylene-responsive transcription factor PpERF9 represses PpRAP2.4 and PpMYB114 via histone deacetylation to inhibit anthocyanin biosynthesis in pear.

Junbei Ni, Simai Wang, Wenjie Yu, Yifei Liao, Chen Pan, Manman Zhang, Ruiyan Tao, Jia Wei, Yuhao Gao, Dongsheng Wang and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
18.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 120 citations in OpenAlex.

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  14. The genomic design of fruit metabolomes.Plant communications · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Junbei NiDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.ORCID 0000-0001-8033-5094
Simai WangDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Wenjie YuDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Yifei LiaoDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Chen PanDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Manman ZhangDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Ruiyan TaoDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Jia WeiDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Yuhao GaoDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Dongsheng WangInstitute of Horticulture, Henan Academy of Agricultural Sciences, Zhengzhou 450002, People's Republic of China.
Songling BaiDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.
Yuanwen TengDepartment of Horticulture, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China.ORCID 0000-0001-8656-9035
Ministry of Agriculture and Rural Affairs · CNSanya University · CNHenan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ethylene induces anthocyanin biosynthesis in most fruits, including apple (Malus domestica) and plum (Prunus spp.). By contrast, ethylene inhibits anthocyanin biosynthesis in pear (Pyrus spp.), but the underlying molecular mechanism remains unclear. In this study, we identified and characterized an ethylene-induced ETHYLENE RESPONSE FACTOR (ERF) transcription factor, PpETHYLENE RESPONSE FACTOR9 (PpERF9), which functions as a transcriptional repressor. Our analyses indicated PpERF9 can directly inhibit expression of the MYB transcription factor gene PpMYB114 by binding to its promoter. Additionally, PpERF9 inhibits the expression of the transcription factor gene PpRELATED TO APETALA2.4 (PpRAP2.4), which activates PpMYB114 expression, by binding to its promoter, thus forming a PpERF9-PpRAP2.4-PpMYB114 regulatory circuit. Furthermore, PpERF9 interacts with the co-repressor PpTOPLESS1 (PpTPL1) via EAR motifs to form a complex that removes the acetyl group on histone H3 and maintains low levels of acetylated H3 in the PpMYB114 and PpRAP2.4 promoter regions. The resulting suppressed expression of these 2 genes leads to decreased anthocyanin biosynthesis in pear. Collectively, these results indicate that ethylene inhibits anthocyanin biosynthesis by a mechanism that involves PpERF9-PpTPL1 complex-mediated histone deacetylation of PpMYB114 and PpRAP2.4. The data presented herein will be useful for clarifying the relationship between chromatin status and hormone signaling, with implications for plant biology research.

Indexed as

MalusPyrusAnthocyaninsEthylenesFruitGene Expression Regulation, PlantHistonesPlant ProteinsTranscription FactorsAnthocyaninsethyleneEthylenesHistonesPlant ProteinsTranscription Factors

Identifiers

PMID36916511
PMCPMC10226596
OpenAlexW4324129213

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.