Evidence map›Paper›PMID 36916290›Full record

ArticleCancer medicine2023

Genetic and immune microenvironment characterization of HER2-positive gastric cancer: Their association with response to trastuzumab-based treatment.

Hyun Jung Kwon, Yujun Park, Soo Kyung Nam, Enoch Kang, Ka-Kyung Kim, Inhae Jeong, Yoonjin Kwak, Jeesun Yoon, Tae-Yong Kim, Keun-Wook Lee and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Assessing clinical pathological characteristics and gene expression patterns associated with hepatoid adenocarcinoma of the stomach.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2024
    Article
  7. Review
  8. Article
  9. HER2International journal of oncology · 2024
    Review
  10. Adavosertib Enhances Antitumor Activity of Trastuzumab Deruxtecan in HER2-Expressing Cancers.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Hyun Jung KwonDepartment of Pathology, Seoul National University Bundang Hospital, Seongnam, Republic of Korea.
Yujun ParkDepartment of Pathology, Seoul National University Bundang Hospital, Seongnam, Republic of Korea.
Soo Kyung NamDepartment of Pathology, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Enoch KangSeoul National University College of Medicine, Seoul, Republic of Korea.
Ka-Kyung KimMacrogen Inc., Seoul, Republic of Korea.
Inhae JeongMacrogen Inc., Seoul, Republic of Korea.
Yoonjin KwakDepartment of Pathology, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Jeesun YoonDepartment of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Tae-Yong KimDepartment of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Keun-Wook LeeDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Do-Youn OhCancer Research Institute, Seoul National University, Seoul, Republic of Korea.
Seock-Ah ImCancer Research Institute, Seoul National University, Seoul, Republic of Korea.
Seong-Ho KongDepartment of Surgery, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Do Joong ParkCancer Research Institute, Seoul National University, Seoul, Republic of Korea.
Hyuk-Joon LeeCancer Research Institute, Seoul National University, Seoul, Republic of Korea.ORCID 0000-0002-9530-647X
Hyung-Ho KimDepartment of Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.
Han-Kwang YangCancer Research Institute, Seoul National University, Seoul, Republic of Korea.
Hye Seung LeeDepartment of Pathology, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID 0000-0002-1667-7986
Seoul National University · KRSeoul National University Hospital · KRSeoul National University Bundang Hospital · KRMacrogen (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe aimed to determine the molecular and immune microenvironment characteristics of HER2-positive gastric cancer (GC) related to the patient's response to first-line trastuzumab-based treatment.

methodsEighty-three cases of HER2-positive advanced gastric adenocarcinoma patients treated with trastuzumab were enrolled. Targeted deep sequencing and transcriptome analysis were performed on selected 21 cases (exploration cohort) along with two post-treatment samples. The results were compared between patients progressed before 6 months (Group 2) and others (Group 1), and were validated by FISH and immunohistochemistry in total cohort. Tumor-infiltrating immune cells were evaluated using RNA sequencing data and multiplex immunohistochemistry. Progression-free survival (PFS) analysis was performed.

resultsGroup 1 showed frequent amplification of G1/S cell cycle checkpoint-related genes and upregulated KEGG pathways related to cell proliferation. In contrast, Group 2 had more frequent EGFR, HER3, and MET amplification and higher RNA expression in immune-related KEGG pathways than Group 1. In total cohort, significant predictors of better PFS were cell cycle-related including CCNE1 amplification, Cyclin A and PLK1 overexpression, and decreased Cyclin D3 and HER3 expression (p < 0.05), or immune-related including high density of CD3

conclusionHER2-positive GC with favorable response to trastuzumab were characterized by cell cycle-related gene alterations and increased CD3

Indexed as

Stomach NeoplasmsCell ProliferationErb-b2 Receptor Tyrosine KinasesHumansPrognosisTrastuzumabTumor MicroenvironmentErb-b2 Receptor Tyrosine KinasesTrastuzumabcell cycleHER2-positive gastric cancerNK cellPD-L1trastuzumab

Identifiers

PMID36916290
PMCPMC10225221
OpenAlexW4324129747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.