Evidence map›Paper›PMID 36909617›Full record

ArticlebioRxiv : the preprint server for biology2023

Induction of viral mimicry upon loss of DHX9 and ADAR1 in breast cancer cells.

Kyle A Cottrell, Sua Ryu, Luisangely Soto Torres, Angela M Schab, Jason D Weber

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kyle A CottrellDepartment of Medicine, Division of Molecular Oncology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Sua RyuDepartment of Medicine, Division of Molecular Oncology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Luisangely Soto TorresDepartment of Medicine, Division of Molecular Oncology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Angela M SchabDepartment of Medicine, Division of Molecular Oncology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Jason D WeberDepartment of Medicine, Division of Molecular Oncology, Washington University School of Medicine, Saint Louis, Missouri, USA.
Washington University in St. Louis · US

Funding

OPPORTUNITIES IN GENOMICS RESEARCH: INCREASING DIVERSITY AND RETENTION IN STEMR25HG006687 · NHGRI · WASHINGTON UNIVERSITY · PI MITRA, ROBI D, SKEATH, JAMES BENJAMIN · 2012 to 2025
$4.1M
Antagonistic role of ARF and ADAR1 in triple-negative breast cancerR01CA262804 · NCI · WASHINGTON UNIVERSITY · PI Jason Weber · 2022 to 2026
$2.1M
MAXIMIZING STUDENT DIVERSITY IN THE BIOMEDICAL SCIENCES AT WASHINGTON UNIVERSITYT32GM148405 · NIGMS · WASHINGTON UNIVERSITY · PI HERMANSTYNE, TRACEY O, SKEATH, JAMES BENJAMIN · 2023 to 2025
$1.7M
Identifying determinants of ADAR-dependency in triple-negative breast cancerR00MD016946 · NIMHD · PURDUE UNIVERSITY · PI COTTRELL, KYLE · 2023 to 2025
$722k
Identifying determinants of ADAR-dependency in triple-negative breast cancerK99MD016946 · NIMHD · WASHINGTON UNIVERSITY · PI COTTRELL, KYLE · 2022 to 2023
$108k
NCI NIH HHS R01 CA262804NHGRI NIH HHS R25 HG006687NIGMS NIH HHS T32 GM148405NIMHD NIH HHS K99 MD016946NIMHD NIH HHS R00 MD016946
6 · The paper itself

Abstract

Detection of viral double-stranded RNA (dsRNA) is an important component of innate immunity. However, many endogenous RNAs containing double-stranded regions can be misrecognized and activate innate immunity. The interferon inducible ADAR1-p150 suppresses dsRNA sensing, an essential function for ADAR1 in many cancers, including breast. Although ADAR1-p150 has been well established in this role, the functions of the constitutively expressed ADAR1-p110 isoform are less understood. We used proximity labeling to identify putative ADAR1-p110 interacting proteins in breast cancer cell lines. Of the proteins identified, the RNA helicase DHX9 was of particular interest. Knockdown of DHX9 in ADAR1-dependent cell lines caused cell death and activation of the dsRNA sensor PKR. In ADAR1-independent cell lines, combined knockdown of DHX9 and ADAR1, but neither alone, caused activation of multiple dsRNA sensing pathways leading to a viral mimicry phenotype. Together, these results reveal an important role for DHX9 in suppressing dsRNA sensing by multiple pathways.

Identifiers

PMID36909617
PMCPMC10002699
OpenAlexW4322486787

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.