Evidence map›Paper›PMID 36906623›Full record

ArticleNature communications2023

Microbiota alters the metabolome in an age- and sex- dependent manner in mice.

Kirsty Brown, Carolyn A Thomson, Soren Wacker, Marija Drikic, Ryan Groves, Vina Fan, Ian A Lewis, Kathy D McCoy

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In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Trial
  2. Sex-dependent mechanisms in rheumatic diseases.Nature reviews. Rheumatology · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Foods (Basel, Switzerland) · 2026
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kirsty BrownDepartment of Physiology and Pharmacology, Snyder Institute of Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, T2N 4N1, Canada.ORCID 0000-0003-1410-4532
Carolyn A ThomsonDepartment of Physiology and Pharmacology, Snyder Institute of Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, T2N 4N1, Canada.
Soren WackerDepartment of Biological Sciences, University of Calgary, Calgary, T2N 1N4, Canada.ORCID 0000-0003-3201-1233
Marija DrikicDepartment of Biological Sciences, University of Calgary, Calgary, T2N 1N4, Canada.
Ryan GrovesDepartment of Biological Sciences, University of Calgary, Calgary, T2N 1N4, Canada.
Vina FanDepartment of Physiology and Pharmacology, Snyder Institute of Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, T2N 4N1, Canada.ORCID 0000-0002-2218-2103
Ian A LewisDepartment of Biological Sciences, University of Calgary, Calgary, T2N 1N4, Canada.ORCID 0000-0002-5753-499X
Kathy D McCoyDepartment of Physiology and Pharmacology, Snyder Institute of Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, T2N 4N1, Canada. kathy.mccoy@ucalgary.ca.ORCID 0000-0002-3900-9227

Funding

CIHR PJT-165930
6 · The paper itself

Abstract

Commensal bacteria are major contributors to mammalian metabolism. We used liquid chromatography mass spectrometry to study the metabolomes of germ-free, gnotobiotic, and specific-pathogen-free mice, while also evaluating the influence of age and sex on metabolite profiles. Microbiota modified the metabolome of all body sites and accounted for the highest proportion of variation within the gastrointestinal tract. Microbiota and age explained similar amounts of variation the metabolome of urine, serum, and peritoneal fluid, while age was the primary driver of variation in the liver and spleen. Although sex explained the least amount of variation at all sites, it had a significant impact on all sites except the ileum. Collectively, these data illustrate the interplay between microbiota, age, and sex in the metabolic phenotypes of diverse body sites. This provides a framework for interpreting complex metabolic phenotypes and will help guide future studies into the role that the microbiome plays in disease.

Indexed as

MetabolomeMicrobiotaAnimalsGastrointestinal TractGerm-Free LifeMammalsMetabolomicsMiceSpecific Pathogen-Free Organisms

Identifiers

PMID36906623
PMCPMC10008592

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.