Evidence map›Paper›PMID 36903648›Full record

ArticleMolecules (Basel, Switzerland)2023

QM/MM Modeling of the Flavin Functionalization in the RutA Monooxygenase.

Bella Grigorenko, Tatiana Domratcheva, Alexander Nemukhin

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Article in Molecules (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bella GrigorenkoDepartment of Chemistry, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.
Tatiana DomratchevaDepartment of Chemistry, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.
Alexander NemukhinDepartment of Chemistry, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0002-4992-6029

Funding

Russian Science Foundation 22-13-00012
6 · The paper itself

Abstract

Oxygenase activity of the flavin-dependent enzyme RutA is commonly associated with the formation of flavin-oxygen adducts in the enzyme active site. We report the results of quantum mechanics/molecular mechanics (QM/MM) modeling of possible reaction pathways initiated by various triplet state complexes of the molecular oxygen with the reduced flavin mononucleotide (FMN) formed in the protein cavities. According to the calculation results, these triplet-state flavin-oxygen complexes can be located at both

Indexed as

Mixed Function OxygenasesRutaFlavin MononucleotideFlavinsOxidation-ReductionOxygenPeroxidesFlavin MononucleotideFlavinsMixed Function OxygenasesOxygenPeroxidesabsorption spectraflavinmolecular oxygenmonooxygenasesQM/MMquantum chemistryRutA enzyme

Identifiers

PMID36903648
PMCPMC10005588

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.