Evidence map›Paper›PMID 36902312›Full record

ArticleInternational journal of molecular sciences2023

Combinatorial Blood Platelets-Derived circRNA and mRNA Signature for Early-Stage Lung Cancer Detection.

Silvia D'Ambrosi, Stavros Giannoukakos, Mafalda Antunes-Ferreira, Carlos Pedraz-Valdunciel, Jillian W P Bracht, Nicolas Potie, Ana Gimenez-Capitan, Michael Hackenberg, Alberto Fernandez Hilario, Miguel A Molina-Vila and 3 more

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In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
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  4. Review
  5. Article
  6. Article
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  8. Review
  9. Review
  10. Article
  11. Circular RNA in Exosomes and Its Clinical Significance.Advances in experimental medicine and biology · 2025
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Circular RNAs: characteristics, functions, mechanisms, and potential applications in thyroid cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2024
    Review
  17. Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Silvia D'AmbrosiDepartment of Neurosurgery, Cancer Center Amsterdam, Amsterdam University Medical Center, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands.
Stavros GiannoukakosDepartment of Genetics, Faculty of Science, University of Granada, 18071 Granada, Spain.ORCID 0000-0001-8190-4199
Mafalda Antunes-FerreiraDepartment of Neurosurgery, Cancer Center Amsterdam, Amsterdam University Medical Center, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands.ORCID 0000-0001-6644-8930
Carlos Pedraz-ValduncielDepartment of Biochemistry, Molecular Biology and Biomedicine, Universitat Autónoma de Barcelona (UAB), 08193 Cerdanyola, Spain.ORCID 0000-0002-3163-2444
Jillian W P BrachtPangaea Oncology-Laboratory of Oncology, Quirón Dexeus University Hospital, Sabino Arana 5-19, 08028 Barcelona, Spain.ORCID 0000-0001-9552-3960
Nicolas PotieDepartment of Genetics, Faculty of Science, University of Granada, 18071 Granada, Spain.
Ana Gimenez-CapitanPangaea Oncology-Laboratory of Oncology, Quirón Dexeus University Hospital, Sabino Arana 5-19, 08028 Barcelona, Spain.ORCID 0000-0003-2575-1225
Michael HackenbergDepartment of Genetics, Faculty of Science, University of Granada, 18071 Granada, Spain.ORCID 0000-0003-2248-3114
Alberto Fernandez HilarioAndalusian Research Institute in Data Science and Computational Intelligence, University of Granada, 18071 Granada, Spain.ORCID 0000-0002-6480-8434
Miguel A Molina-VilaPangaea Oncology-Laboratory of Oncology, Quirón Dexeus University Hospital, Sabino Arana 5-19, 08028 Barcelona, Spain.ORCID 0000-0001-8866-9881
Rafael RosellGermans Trias i Pujol Health Sciences Institute and Hospital (IGTP), 08916 Barcelona, Spain.
Thomas WürdingerDepartment of Neurosurgery, Cancer Center Amsterdam, Amsterdam University Medical Center, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands.
Danijela Koppers-LalicMathematical Institute, Leiden University, 2333 CA Leiden, The Netherlands.ORCID 0000-0002-1050-7521

Funding

European Union's Horizon 2020 Marie Skłodowska-Curie 765492
6 · The paper itself

Abstract

Despite the diversity of liquid biopsy transcriptomic repertoire, numerous studies often exploit only a single RNA type signature for diagnostic biomarker potential. This frequently results in insufficient sensitivity and specificity necessary to reach diagnostic utility. Combinatorial biomarker approaches may offer a more reliable diagnosis. Here, we investigated the synergistic contributions of circRNA and mRNA signatures derived from blood platelets as biomarkers for lung cancer detection. We developed a comprehensive bioinformatics pipeline permitting an analysis of platelet-circRNA and mRNA derived from non-cancer individuals and lung cancer patients. An optimal selected signature is then used to generate the predictive classification model using machine learning algorithm. Using an individual signature of 21 circRNA and 28 mRNA, the predictive models reached an area under the curve (AUC) of 0.88 and 0.81, respectively. Importantly, combinatorial analysis including both types of RNAs resulted in an 8-target signature (6 mRNA and 2 circRNA), enhancing the differentiation of lung cancer from controls (AUC of 0.92). Additionally, we identified five biomarkers potentially specific for early-stage detection of lung cancer. Our proof-of-concept study presents the first multi-analyte-based approach for the analysis of platelets-derived biomarkers, providing a potential combinatorial diagnostic signature for lung cancer detection.

Indexed as

Lung NeoplasmsRNA, CircularBiomarkersBiomarkers, TumorBlood PlateletsHumansRNA, MessengerBiomarkersBiomarkers, TumorRNA, CircularRNA, Messengerbiomarkerscancer diagnosiscircular RNAliquid biopsylung cancermessenger RNAplatelets

Identifiers

PMID36902312
PMCPMC10003255

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Textfull text, public
LicenceCC BY
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table measurements read11
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.