Evidence map›Paper›PMID 36902164›Full record

ArticleInternational journal of molecular sciences2023

Selectivity of Hydroxamate- and Difluoromethyloxadiazole-Based Inhibitors of Histone Deacetylase 6 In Vitro and in Cells.

Jakub Ptacek, Ivan Snajdr, Jiri Schimer, Zsofia Kutil, Jana Mikesova, Petra Baranova, Barbora Havlinova, Werner Tueckmantel, Pavel Majer, Alan Kozikowski and 1 more

Open access · goldFull text read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  11. Lack of effect from genetic deletion of Hdac6 in a humanized mouse model of CMT2D.Journal of the peripheral nervous system : JPNS · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Jakub PtacekInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.ORCID 0000-0002-9099-6387
Ivan SnajdrInstitute of Organic Chemistry and Biochemistry of the Academy of Sciences of the Czech Republic, Flemingovo n. 2, 166 10 Prague 6, Czech Republic.ORCID 0000-0002-0831-4034
Jiri SchimerInstitute of Organic Chemistry and Biochemistry of the Academy of Sciences of the Czech Republic, Flemingovo n. 2, 166 10 Prague 6, Czech Republic.
Zsofia KutilInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.ORCID 0000-0001-9936-9518
Jana MikesovaInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.
Petra BaranovaInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.
Barbora HavlinovaInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.
Werner TueckmantelStarWise Therapeutics LLC, University Research Park, Inc., Madison, WI 53719, USA.
Pavel MajerInstitute of Organic Chemistry and Biochemistry of the Academy of Sciences of the Czech Republic, Flemingovo n. 2, 166 10 Prague 6, Czech Republic.
Alan KozikowskiStarWise Therapeutics LLC, University Research Park, Inc., Madison, WI 53719, USA.
Cyril BarinkaInstitute of Biotechnology CAS, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic.ORCID 0000-0003-2751-3060
Czech Academy of Sciences, Institute of Biotechnology · CZCzech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZUniversity of Illinois Chicago · US

Funding

Development of selective HDAC6 inhibitors to improve cancer immunotherapyR01CA249248 · NCI · GEORGE WASHINGTON UNIVERSITY · PI VILLAGRA, ALEJANDRO V, WARDROP, DUNCAN JOHN · 2021 to 2025
$3.0M
NCI NIH HHS R01 CA249248NIH HHS 5R01CA249248-02
6 · The paper itself

Abstract

Histone deacetylase 6 (HDAC6) is a unique member of the HDAC family of enzymes due to its complex domain organization and cytosolic localization. Experimental data point toward the therapeutic use of HDAC6-selective inhibitors (HDAC6is) for use in both neurological and psychiatric disorders. In this article, we provide side-by-side comparisons of hydroxamate-based HDAC6is frequently used in the field and a novel HDAC6 inhibitor containing the difluoromethyl-1,3,4-oxadiazole function as an alternative zinc-binding group (compound

Indexed as

Histone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsOxadiazolesAcetylationCell Line, TumorHumansProtein Processing, Post-TranslationalHDAC10 protein, humanHistone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsOxadiazoleshistone deacetylaseinhibitor profilingmetallohydrolasenanoBRETtubulin/histone acetylation

Identifiers

PMID36902164
PMCPMC10003107
OpenAlexW4322742851

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read81
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.