Evidence map›Paper›PMID 36901987›Full record

ArticleInternational journal of molecular sciences2023

Psoriatic Resolved Skin Epidermal Keratinocytes Retain Disease-Residual Transcriptomic and Epigenomic Profiles.

Ameneh Ghaffarinia, Ferhan Ayaydin, Szilárd Póliska, Máté Manczinger, Beáta Szilvia Bolla, Lili Borbála Flink, Fanni Balogh, Zoltán Veréb, Renáta Bozó, Kornélia Szabó and 2 more

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In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  12. From PsO to PsA: the role of TFrontiers in medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Ameneh GhaffariniaHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.
Ferhan AyaydinHCEMM-USZ, Functional Cell Biology and Immunology, Advanced Core Facility, H-6728 Szeged, Hungary.
Szilárd PóliskaGenomic Medicine and Bioinformatics Core Facility, Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-9722-251X
Máté ManczingerDepartment of Dermatology and Allergology, Albert Szent-Györgyi Medical School, University of Szeged, H-6720 Szeged, Hungary.
Beáta Szilvia BollaHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.
Lili Borbála FlinkHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.ORCID 0000-0002-8463-9199
Fanni BaloghHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.
Zoltán VerébRegenerative Medicine and Cellular Pharmacology Laboratory (HECRIN), Department of Dermatology and Allergology, University of Szeged, H-6720 Szeged, Hungary.
Renáta BozóHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.ORCID 0000-0003-4242-2474
Kornélia SzabóHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.
Zsuzsanna Bata-CsörgőHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.
Lajos KeményHCEMM-USZ Skin Research Group, H-6720 Szeged, Hungary.ORCID 0000-0002-2119-9501

Funding

EU's Horizon 2020 research and innovation program 739593Hungarian National Research, Development and Innovation Office K135084Hungarian National Research, Development and Innovation Office K143576
6 · The paper itself

Abstract

The disease-residual transcriptomic profile (DRTP) within psoriatic healed/resolved skin and epidermal tissue-resident memory T (TRM) cells have been proposed to be crucial for the recurrence of old lesions. However, it is unclear whether epidermal keratinocytes are involved in disease recurrence. There is increasing evidence regarding the importance of epigenetic mechanisms in the pathogenesis of psoriasis. Nonetheless, the epigenetic changes that contribute to the recurrence of psoriasis remain unknown. The aim of this study was to elucidate the role of keratinocytes in psoriasis relapse. The epigenetic marks 5-methylcytosine (5-mC) and 5-hydroxymethylcytosine (5-hmC) were visualized using immunofluorescence staining, and RNA sequencing was performed on paired never-lesional and resolved epidermal and dermal compartments of skin from psoriasis patients. We observed diminished 5-mC and 5-hmC amounts and decreased mRNA expression of the ten-eleven translocation (TET) 3 enzyme in the resolved epidermis. SAMHD1, C10orf99, and AKR1B10: the highly dysregulated genes in resolved epidermis are known to be associated with pathogenesis of psoriasis, and the DRTP was enriched in WNT, TNF, and mTOR signaling pathways. Our results suggest that epigenetic changes detected in epidermal keratinocytes of resolved skin may be responsible for the DRTP in the same regions. Thus, the DRTP of keratinocytes may contribute to site-specific local relapse.

Indexed as

PsoriasisTranscriptomeEpidermisEpigenomicsHumansKeratinocytesSkin5-hmC5-mCepigenomicskeratinocytepsoriasisrelapsetranscriptomics

Identifiers

PMID36901987
PMCPMC10002496

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.