Evidence map›Paper›PMID 36900269›Full record

ArticleCancers2023

Involvement of Epithelial-Mesenchymal Transition Genes in Small Cell Lung Cancer Phenotypic Plasticity.

Sarah M Groves, Nicholas Panchy, Darren R Tyson, Leonard A Harris, Vito Quaranta, Tian Hong

Open access · goldFull text read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sarah M GrovesDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA.ORCID 0000-0002-3122-2605
Nicholas PanchyDepartment of Biochemistry & Cellular and Molecular Biology, The University of Tennessee, Knoxville, TN 37996, USA.
Darren R TysonDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA.ORCID 0000-0002-3272-4308
Leonard A HarrisDepartment of Biomedical Engineering, University of Arkansas, Fayetteville, AR 72701, USA.ORCID 0000-0003-2112-6940
Vito QuarantaDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA.
Tian HongDepartment of Biochemistry & Cellular and Molecular Biology, The University of Tennessee, Knoxville, TN 37996, USA.
Vanderbilt University · USNational Institute for Mathematical and Biological Synthesis · USUniversity of Tennessee at Knoxville · USWinthrop Rockefeller Foundation · US

Funding

Single-Cell Biology and Data Analysis Shared Resource (SCB-DA SR)U54CA217450 · NCI · VANDERBILT UNIVERSITY · PI WEAVER, ALISSA M · 2018 to 2022
$8.5M
Phenotype Transitions in Small Cell Lung CancerU01CA215845 · NCI · VANDERBILT UNIVERSITY · PI LOPEZ, CARLOS FEDERICO, QUARANTA, VITO · 2017 to 2021
$2.8M
Research Specialist in Cancer Systems BiologyR50CA243783 · NCI · VANDERBILT UNIVERSITY · PI TYSON, DARREN R · 2019 to 2023
$781k
Mathametical modeling of cell fate transitions regulated by ultra-feedbacksR01GM140462 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI HONG, TIAN · 2020 to 2022
$600k
Uncovering the molecular networks underlying non-genetic heterogeneity in cancer cell populationsK22CA237857 · NCI · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI HARRIS, LEONARD ALFREDO L. · 2020 to 2022
$563k
NCI NIH HHS K22 CA237857NCI NIH HHS K22CA237857NCI NIH HHS R50CA24378NCI NIH HHS R50 CA243783NCI NIH HHS U01 CA215845NCI NIH HHS U54 CA217450NCI NIH HHS U54CA217450NIGMS NIH HHS R01 GM140462NIGMS NIH HHS R01GM140462
6 · The paper itself

Abstract

Small cell lung cancer (SCLC) is an aggressive cancer recalcitrant to treatment, arising predominantly from epithelial pulmonary neuroendocrine (NE) cells. Intratumor heterogeneity plays critical roles in SCLC disease progression, metastasis, and treatment resistance. At least five transcriptional SCLC NE and non-NE cell subtypes were recently defined by gene expression signatures. Transition from NE to non-NE cell states and cooperation between subtypes within a tumor likely contribute to SCLC progression by mechanisms of adaptation to perturbations. Therefore, gene regulatory programs distinguishing SCLC subtypes or promoting transitions are of great interest. Here, we systematically analyze the relationship between SCLC NE/non-NE transition and epithelial to mesenchymal transition (EMT)-a well-studied cellular process contributing to cancer invasiveness and resistance-using multiple transcriptome datasets from SCLC mouse tumor models, human cancer cell lines, and tumor samples. The NE SCLC-A2 subtype maps to the epithelial state. In contrast, SCLC-A and SCLC-N (NE) map to a partial mesenchymal state (M1) that is distinct from the non-NE, partial mesenchymal state (M2). The correspondence between SCLC subtypes and the EMT program paves the way for further work to understand gene regulatory mechanisms of SCLC tumor plasticity with applicability to other cancer types.

Indexed as

cellular plasticityepithelial–mesenchymal transitionsingle-cell RNA-sequencingsmall cell lung cancer

Identifiers

PMID36900269
PMCPMC10001072
OpenAlexW4322502359

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read19
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.