Evidence map›Paper›PMID 36900210›Full record

ArticleCancers2023

Interpretable and Reliable Oral Cancer Classifier with Attention Mechanism and Expert Knowledge Embedding via Attention Map.

Bofan Song, Chicheng Zhang, Sumsum Sunny, Dharma Raj Kc, Shaobai Li, Keerthi Gurushanth, Pramila Mendonca, Nirza Mukhia, Sanjana Patrick, Shubha Gurudath and 13 more

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In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Bofan SongWyant College of Optical Sciences, The University of Arizona, Tucson, AZ 85721, USA.
Chicheng ZhangComputer Science Department, The University of Arizona, Tucson, AZ 85721, USA.
Sumsum SunnyMazumdar Shaw Medical Centre, Bangalore 560099, India.
Dharma Raj KcComputer Science Department, The University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0003-0676-2391
Shaobai LiWyant College of Optical Sciences, The University of Arizona, Tucson, AZ 85721, USA.
Keerthi GurushanthKLE Society Institute of Dental Sciences, Bangalore 560022, India.
Pramila MendoncaMazumdar Shaw Medical Foundation, Bangalore 560099, India.
Nirza MukhiaKLE Society Institute of Dental Sciences, Bangalore 560022, India.
Sanjana PatrickBiocon Foundation, Bangalore 560100, India.
Shubha GurudathKLE Society Institute of Dental Sciences, Bangalore 560022, India.
Subhashini RaghavanKLE Society Institute of Dental Sciences, Bangalore 560022, India.
Imchen TsusennaroChristian Institute of Health Sciences and Research, Dimapur 797115, India.
Shirley T LeivonChristian Institute of Health Sciences and Research, Dimapur 797115, India.
Trupti KolurMazumdar Shaw Medical Foundation, Bangalore 560099, India.
Vivek ShettyMazumdar Shaw Medical Foundation, Bangalore 560099, India.
Vidya BushanMazumdar Shaw Medical Foundation, Bangalore 560099, India.ORCID 0000-0001-9683-3207
Rohan RameshChristian Institute of Health Sciences and Research, Dimapur 797115, India.
Vijay PillaiMazumdar Shaw Medical Foundation, Bangalore 560099, India.
Petra Wilder-SmithBeckman Laser Institute & Medical Clinic, University of California, Irvine, CA 92617, USA.
Amritha SureshMazumdar Shaw Medical Centre, Bangalore 560099, India.
Moni Abraham KuriakoseCochin Cancer Research Center, Kochi 683503, India.
Praveen BirurKLE Society Institute of Dental Sciences, Bangalore 560022, India.ORCID 0000-0001-5287-8323
Rongguang LiangWyant College of Optical Sciences, The University of Arizona, Tucson, AZ 85721, USA.

Funding

Multimodal Intraoral Imaging System for Oral Cancer Detection and Diagnosis in Low Resource SettingR01DE030682 · NIDCR · UNIVERSITY OF ARIZONA · PI LIANG, RONGGUANG · 2021 to 2025
$2.8M
Low-cost Mobile Oral Cancer Screening for Low Resource SettingUH3CA239682 · NCI · UNIVERSITY OF ARIZONA · PI LIANG, RONGGUANG · 2018 to 2020
$2.5M
NCI NIH HHS UH3 CA239682NIDCR NIH HHS R01 DE030682NIDCR NIH HHS R01DE030682NIDCR NIH HHS R01DE030682-02S1
6 · The paper itself

Abstract

Convolutional neural networks have demonstrated excellent performance in oral cancer detection and classification. However, the end-to-end learning strategy makes CNNs hard to interpret, and it can be challenging to fully understand the decision-making procedure. Additionally, reliability is also a significant challenge for CNN based approaches. In this study, we proposed a neural network called the attention branch network (ABN), which combines the visual explanation and attention mechanisms to improve the recognition performance and interpret the decision-making simultaneously. We also embedded expert knowledge into the network by having human experts manually edit the attention maps for the attention mechanism. Our experiments have shown that ABN performs better than the original baseline network. By introducing the Squeeze-and-Excitation (SE) blocks to the network, the cross-validation accuracy increased further. Furthermore, we observed that some previously misclassified cases were correctly recognized after updating by manually editing the attention maps. The cross-validation accuracy increased from 0.846 to 0.875 with the ABN (Resnet18 as baseline), 0.877 with SE-ABN, and 0.903 after embedding expert knowledge. The proposed method provides an accurate, interpretable, and reliable oral cancer computer-aided diagnosis system through visual explanation, attention mechanisms, and expert knowledge embedding.

Indexed as

attention branch networkattention mapattention mechanismexpert knowledge embeddinghuman-in-the-loop deep learningvisual explanation

Identifiers

PMID36900210
PMCPMC10001266

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LicenceCC BY
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.