Evidence map›Paper›PMID 36899881›Full record

ArticleCells2023

Cerebellar Transcriptomic Analysis in a Chronic plus Binge Mouse Model of Alcohol Use Disorder Demonstrates Ethanol-Induced Neuroinflammation and Altered Glial Gene Expression.

Kalee N Holloway, Marisa R Pinson, James C Douglas, Tonya M Rafferty, Cynthia J M Kane, Rajesh C Miranda, Paul D Drew

Open access · goldFull text read
In one paragraph

Article in Cells, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. The Neuroimmune System and the Cerebellum.Cerebellum (London, England) · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kalee N HollowayDepartment of Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Marisa R PinsonDepartment of Neuroscience and Experimental Therapeutics, Texas A&M University School of Medicine, Bryan, TX 77807, USA.ORCID 0000-0001-6477-9285
James C DouglasDepartment of Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Tonya M RaffertyDepartment of Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Cynthia J M KaneDepartment of Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Rajesh C MirandaDepartment of Neuroscience and Experimental Therapeutics, Texas A&M University School of Medicine, Bryan, TX 77807, USA.
Paul D DrewDepartment of Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.ORCID 0000-0001-8984-8099
University of Arkansas for Medical Sciences · USTexas A&M Health Science Center · US

Funding

Translational Training in AddictionT32DA022981 · NIDA · UNIV OF ARKANSAS FOR MED SCIS · PI Melissa Jean Zielinski · 2009 to 2026
$6.1M
Dynamic neuroimmune interactions in the onset and progression of FASDR01AA027111 · NIAAA · UNIV OF ARKANSAS FOR MED SCIS · PI DREW, PAUL D, MAJEWSKA, ANNA K · 2018 to 2022
$2.3M
Neuroinflammation: Role in FASD Cognitive DeficitsR01AA026665 · NIAAA · UNIV OF ARKANSAS FOR MED SCIS · PI DREW, PAUL D, HAMILTON, DEREK A. · 2018 to 2022
$1.9M
Regulation of Neuroimmune Responses in FASD ModelsR01AA024695 · NIAAA · UNIV OF ARKANSAS FOR MED SCIS · PI DREW, PAUL D, KANE, CYNTHIA J. · 2016 to 2020
$1.7M
Systems Pharmacology and Toxicology Training ProgramT32GM106999 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI PRATHER, PAUL L · 2013 to 2022
$1.4M
Gag-like Proteins in exosome-mediated Neural Development and Fetal Alcohol Spectrum DisordersF30AA027698 · NIAAA · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PINSON, MARISA · 2019 to 2023
$179k
NIAAA NIH HHS F30 AA027698NIAAA NIH HHS R01 AA024695NIAAA NIH HHS R01 AA026665NIAAA NIH HHS R01 AA027111NIDA NIH HHS T32 DA022981NIGMS NIH HHS T32 GM106999
6 · The paper itself

Abstract

Alcohol use disorder (AUD) is one of the most common preventable mental health disorders and can result in pathology within the CNS, including the cerebellum. Cerebellar alcohol exposure during adulthood has been associated with disruptions in proper cerebellar function. However, the mechanisms regulating ethanol-induced cerebellar neuropathology are not well understood. High-throughput next generation sequencing was performed to compare control versus ethanol-treated adult C57BL/6J mice in a chronic plus binge model of AUD. Mice were euthanized, cerebella were microdissected, and RNA was isolated and submitted for RNA-sequencing. Down-stream transcriptomic analyses revealed significant changes in gene expression and global biological pathways in control versus ethanol-treated mice that included pathogen-influenced signaling pathways and cellular immune response pathways. Microglial-associated genes showed a decrease in homeostasis-associated transcripts and an increase in transcripts associated with chronic neurodegenerative diseases, while astrocyte-associated genes showed an increase in transcripts associated with acute injury. Oligodendrocyte lineage cell genes showed a decrease in transcripts associated with both immature progenitors as well as myelinating oligodendrocytes. These data provide new insight into the mechanisms by which ethanol induces cerebellar neuropathology and alterations to the immune response in AUD.

Indexed as

AlcoholismEthanolAnimalsCerebellumChronic DiseaseMiceMice, Inbred C57BLNeuroinflammatory DiseasesRNATranscriptomeEthanolRNAastrocyteAUDmicroglianeuroinflammationoligodendrocytetranscriptomics

Identifiers

PMID36899881
PMCPMC10000476
OpenAlexW4322501081

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read25
identifiers read1
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.