Evidence map›Paper›PMID 36899282›Full record

ArticleArchives of virology2023

Genomic characterization of a novel torradovirus infecting Arctium lappa L. in China.

Zhengnan Li, Lei Zhang, Xudong Fan, Qiaolan Liang, Yahan Chen, Minhui Li, Shuang Song

Abstract read
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In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Genomic Analysis of a NovelMicroorganisms · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhengnan LiCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, 010018, Hohhot, China.
Lei ZhangCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, 010018, Hohhot, China.
Xudong FanResearch Institute of Pomology, Chinese Academy of Agriculture Sciences, 125100, Liaoning, Xingcheng, China.
Qiaolan LiangCollege of Plant Protection, Gansu Agricultural University, 730070, Lanzhou, China.
Yahan ChenCollege of Plant Protection, Gansu Agricultural University, 730070, Lanzhou, China.
Minhui LiInner Mongolia Key Laboratory of Characteristic Geoherbs Resources Protection and Utilization, College of Pharmacy, BaoTou Medical College, 014040, Baotou, China.
Shuang SongCollege of Plant Protection, Northeast Agricultural University, 150030, Harbin, China. songshuang.000@163.com.ORCID http://orcid.org/0000-0001-7410-0088

Funding

National Natural Science Foundation of China 32160031Natural Science Foundation of Inner Mongolia 2019MS03021
6 · The paper itself

Abstract

Burdock (Arctium lappa L.) is not only a popular vegetable crop but also an important medicinal plant. In burdock plants with symptoms of leaf mosaic, a novel torradovirus tentatively named "burdock mosaic virus" (BdMV) was identified by high-throughput sequencing. The complete genomic sequence of BdMV was further determined using RT-PCR and the rapid amplification of cDNA ends (RACE) method. The genome is composed of two positive-sense single-stranded RNAs. RNA1 (6991 nt) encodes a polyprotein of 2186 aa, and RNA2 (4700 nt) encodes a protein of 201 aa and a polyprotein of 1212 aa that is predicted to be processed into one movement protein (MP) and three coat proteins (CPs). The Pro-Pol region of RNA1 and the CP region of RNA2 shared the highest amino acid sequence identity of 74.0% and 70.6%, respectively, with the corresponding sequences of lettuce necrotic leaf curl virus (LNLCV) isolate JG3. Phylogenetic analysis based on the amino acid sequences of the Pro-Pol and CP regions showed that BdMV clustered with other non-tomato-infecting torradoviruses. Taken together, these results suggest that BdMV is a new member of the genus Torradovirus.

Indexed as

ArctiumMosaic VirusesSecoviridaeGenome, ViralGenomicsPhylogenyPlant DiseasesPolyproteinsPolyproteins

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.