Evidence map›Paper›PMID 36897111›Full record

ArticleJournal of the American Chemical Society2023

Semisynthetic Approach to the Analysis of Tumor Suppressor PTEN Ubiquitination.

Reina Iwase, Daniel R Dempsey, Samuel D Whedon, Hanjie Jiang, Brad A Palanski, Bedphiny Deng, Philip A Cole

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Reina IwaseDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.ORCID 0000-0002-3703-2511
Daniel R DempseyDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.
Samuel D WhedonDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.ORCID 0000-0002-3745-5645
Hanjie JiangDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.
Brad A PalanskiDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.
Bedphiny DengDana-Farber/Harvard Cancer Center, Boston, Massachusetts 02115, United States.
Philip A ColeDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States.ORCID 0000-0001-6873-7824
Brigham and Women's Hospital · USBoston University · USUniversity of Massachusetts Amherst · US

Funding

Chemical Approaches to Protein PhosphorylationR01CA074305 · NCI · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2002 to 2025
$8.0M
Mechanisms &Inhibition of Histone AcetyltransferasesR01GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2001 to 2012
$3.8M
Molecular Mechanisms of PTEN and USP7 RegulationR00GM130961 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI DEMPSEY, DANIEL R. · 2022 to 2024
$747k
Chemical Rescue of Protein Kinases for Cell Signaling ApplicationsF32CA259214 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI PALANSKI, BRAD ANDREW · 2021 to 2022
$136k
NCI NIH HHS F32 CA259214NCI NIH HHS R01 CA074305NIGMS NIH HHS R00 GM130961NIGMS NIH HHS R01 GM062437
6 · The paper itself

Abstract

Phosphatase and tensin homologue (PTEN) tumor suppressor protein is a PIP3 lipid phosphatase that is subject to multifaceted post-translational modifications. One such modification is the monoubiquitination of Lys13 that may alter its cellular localization but is also positioned in a manner that could influence several of its cellular functions. To explore the regulatory influence of ubiquitin on PTEN's biochemical properties and its interaction with ubiquitin ligases and a deubiquitinase, the generation of a site-specifically and stoichiometrically ubiquitinated protein could be beneficial. Here, we describe a semisynthetic method that relies upon sequential expressed protein ligation steps to install ubiquitin at a Lys13 mimic in near full-length PTEN. This approach permits the concurrent installation of C-terminal modifications in PTEN, thereby facilitating an analysis of the interplay between N-terminal ubiquitination and C-terminal phosphorylation. We find that the N-terminal ubiquitination of PTEN inhibits its enzymatic function, reduces its binding to lipid vesicles, modulates its processing by NEDD4-1 E3 ligase, and is efficiently cleaved by the deubiquitinase, USP7. Our ligation approach should motivate related efforts for uncovering the effects of ubiquitination of complex proteins.

Indexed as

Endosomal Sorting Complexes Required for TransportUbiquitin-Protein LigasesDeubiquitinating EnzymesLipidsNedd4 Ubiquitin Protein LigasesPTEN PhosphohydrolaseUbiquitinUbiquitinationDeubiquitinating EnzymesEndosomal Sorting Complexes Required for TransportLipidsNedd4 Ubiquitin Protein LigasesPTEN PhosphohydrolaseUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID36897111
PMCPMC10071500
OpenAlexW4323808528

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.