Evidence map›Paper›PMID 36896856›Full record

ArticleThe journal of pathology. Clinical research2023

Development of multiple AI pipelines that predict neoadjuvant chemotherapy response of breast cancer using H&E-stained tissues.

Bin Shen, Akira Saito, Ai Ueda, Koji Fujita, Yui Nagamatsu, Mikihiro Hashimoto, Masaharu Kobayashi, Aashiq H Mirza, Hans Peter Graf, Eric Cosatto and 9 more

Open access · goldAbstract read
In one paragraph

Article in The journal of pathology. Clinical research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Bin ShenDepartment of Molecular Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.ORCID 0000-0003-2812-1712
Akira SaitoDepartment of Molecular Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Ai UedaDepartment of Breast Oncology and Surgery, Tokyo Medical University Hospital, Shinjuku-ku, Tokyo, Japan.
Koji FujitaDepartment of Molecular Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Yui NagamatsuDepartment of Molecular Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Mikihiro HashimotoResearch and Development Division, Chi Corporation, Shinjuku-ku, Tokyo, Japan.
Masaharu KobayashiResearch and Development Division, Chi Corporation, Shinjuku-ku, Tokyo, Japan.
Aashiq H MirzaDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA.
Hans Peter GrafDepartment of Machine Learning, NEC Labs America Inc., Princeton, NJ, USA.
Eric CosattoDepartment of Machine Learning, NEC Labs America Inc., Princeton, NJ, USA.
Shoichi HazamaDepartment of Translational Research and Development Therapeutics against Cancer, School of Medicine, Yamaguchi University, Ube, Yamaguchi, Japan.
Hiroaki NaganoDepartment of Gastroenterological, Breast and Endocrine Surgery, Graduate School of Medicine, Yamaguchi University, Ube, Yamaguchi, Japan.
Eiichi SatoDepartment of Pathology, Institute of Medical Science, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Jun MatsubayashiDepartment of Anatomic Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Toshitaka NagaoDepartment of Anatomic Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.
Esther ChengDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York Presbyterian Hospital, New York, NY, USA.
Syed Af HodaDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York Presbyterian Hospital, New York, NY, USA.
Takashi IshikawaDepartment of Breast Oncology and Surgery, Tokyo Medical University Hospital, Shinjuku-ku, Tokyo, Japan.
Masahiko KurodaDepartment of Molecular Pathology, Tokyo Medical University, Shinjuku-ku, Tokyo, Japan.ORCID 0000-0001-7052-4289
Tokyo Medical University · JPDevelopment Bank of Japan · JPNEC (United States) · USNewYork–Presbyterian Hospital · USYamaguchi University · JPCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, the treatment of breast cancer has advanced dramatically and neoadjuvant chemotherapy (NAC) has become a common treatment method, especially for locally advanced breast cancer. However, other than the subtype of breast cancer, no clear factor indicating sensitivity to NAC has been identified. In this study, we attempted to use artificial intelligence (AI) to predict the effect of preoperative chemotherapy from hematoxylin and eosin images of pathological tissue obtained from needle biopsies prior to chemotherapy. Application of AI to pathological images typically uses a single machine-learning model such as support vector machines (SVMs) or deep convolutional neural networks (CNNs). However, cancer tissues are extremely diverse and learning with a realistic number of cases limits the prediction accuracy of a single model. In this study, we propose a novel pipeline system that uses three independent models each focusing on different characteristics of cancer atypia. Our system uses a CNN model to learn structural atypia from image patches and SVM and random forest models to learn nuclear atypia from fine-grained nuclear features extracted by image analysis methods. It was able to predict the NAC response with 95.15% accuracy on a test set of 103 unseen cases. We believe that this AI pipeline system will contribute to the adoption of personalized medicine in NAC therapy for breast cancer.

Indexed as

Breast NeoplasmsArtificial IntelligenceChemotherapy, AdjuvantFemaleHumansMachine LearningNeoadjuvant Therapyartificial intelligencebreast cancerdigital pathologyneoadjuvant chemotherapy

Identifiers

PMID36896856
PMCPMC10073928
OpenAlexW4323806251

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.