Evidence map›Paper›PMID 36896651›Full record

ArticleThe Plant cell2023

Trans-species microRNA loci in the parasitic plant Cuscuta campestris have a U6-like snRNA promoter.

Collin Hudzik, Sean Maguire, Shengxi Guan, Jeremy Held, Michael J Axtell

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Plant microRNA maturation and function.Nature reviews. Molecular cell biology · 2026
    Review
  4. Article
  5. Article
  6. Open life sciences · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. TheNon-coding RNA · 2023
    Article
  11. Focus on RNA biology.The Plant cell · 2023
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Collin HudzikDepartment of Biology, The Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0002-4836-1767
Sean MaguireNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.ORCID 0000-0003-1610-5977
Shengxi GuanNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.ORCID 0000-0002-1809-8486
Jeremy HeldHuck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0002-5504-7004
Michael J AxtellDepartment of Biology, The Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0001-8951-7361
Pennsylvania State University · USNew England Biolabs (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small regulatory RNAs can move between organisms and regulate gene expression in the recipient. Whether the trans-species small RNAs being exported are distinguished from the normal endogenous small RNAs of the source organism is not known. The parasitic plant Cuscuta campestris (dodder) produces many microRNAs that specifically accumulate at the host-parasite interface, several of which have trans-species activity. We found that induction of C. campestris interface-induced microRNAs is similar regardless of host species and occurs in C. campestris haustoria produced in the absence of any host. The loci-encoding C. campestris interface-induced microRNAs are distinguished by a common cis-regulatory element. This element is identical to a conserved upstream sequence element (USE) used by plant small nuclear RNA loci. The properties of the interface-induced microRNA primary transcripts strongly suggest that they are produced via U6-like transcription by RNA polymerase III. The USE promotes accumulation of interface-induced miRNAs (IIMs) in a heterologous system. This promoter element distinguishes C. campestris IIM loci from other plant small RNAs. Our data suggest that C. campestris IIMs are produced in a manner distinct from canonical miRNAs. All confirmed C. campestris microRNAs with documented trans-species activity are interface-induced and possess these features. We speculate that RNA polymerase III transcription of IIMs may allow these miRNAs to be exported to hosts.

Indexed as

CuscutaMicroRNAsParasitesAnimalsHost-Parasite InteractionsPlantsRNA Polymerase IIIRNA, Small NuclearMicroRNAsRNA Polymerase IIIRNA, Small Nuclear

Identifiers

PMID36896651
PMCPMC10226579
OpenAlexW4323812163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.