Evidence map›Paper›PMID 36894671›Full record

ArticleNature cell biology2023

SARS-CoV-2 infection induces DNA damage, through CHK1 degradation and impaired 53BP1 recruitment, and cellular senescence.

Ubaldo Gioia, Sara Tavella, Pamela Martínez-Orellana, Giada Cicio, Andrea Colliva, Marta Ceccon, Matteo Cabrini, Ana C Henriques, Valeria Fumagalli, Alessia Paldino and 19 more

Open access · hybridAbstract read
In one paragraph

Article in Nature cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
17.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 115 citations in OpenAlex.

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  18. Cellular sensor DAP5 decodesFrontiers in immunology · 2026
    Article
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 7 institutions in 2 countries.

Ubaldo Gioia *IFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.ORCID http://orcid.org/0000-0002-4993-5283
Sara Tavella *IFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.ORCID http://orcid.org/0000-0003-4627-1589
Pamela Martínez-OrellanaInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.
Giada CicioIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Andrea CollivaInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.
Marta CecconIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Matteo CabriniIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Ana C HenriquesIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Valeria FumagalliIRCCS San Raffaele Scientific Institute & University, Milan, Italy.ORCID http://orcid.org/0000-0003-2583-2498
Alessia PaldinoInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.
Ettore PresotUniversity of Padova, Padova, Italy.ORCID http://orcid.org/0000-0002-8446-0105
Sreejith RajasekharanInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.
Nicola IacominoFondazione IRCCS Istituto Neurologico Carlo Besta, Milan, Italy.
Federica PisatiCogentech Società Benefit srl, Milan, Italy.
Valentina MattiIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Sara SepeIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Matilde I ConteIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Sara BarozziIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.
Zeno LavagninoIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.ORCID http://orcid.org/0000-0002-7247-8084
Tea CarlettiInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.ORCID http://orcid.org/0000-0003-2510-2399
Maria Concetta VolpeInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.
Paola CavalcanteFondazione IRCCS Istituto Neurologico Carlo Besta, Milan, Italy.
Matteo IannaconeIRCCS San Raffaele Scientific Institute & University, Milan, Italy.ORCID http://orcid.org/0000-0002-9370-2671
Chiara RampazzoUniversity of Padova, Padova, Italy.ORCID http://orcid.org/0000-0002-1092-2653
Rossana BussaniUniversity of Trieste, Trieste, Italy.
Claudio TripodoIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy.ORCID http://orcid.org/0000-0002-0821-6231
Serena ZacchignaInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.ORCID http://orcid.org/0000-0001-6705-3076
Alessandro MarcelloInternational Centre for Genetic Engineering and Biotechnology, Trieste, Italy.ORCID http://orcid.org/0000-0002-8903-8202
Fabrizio d'Adda di FagagnaIFOM ETS - The AIRC Institute of Molecular Oncology, Milan, Italy. fabrizio.dadda@ifom.eu.ORCID http://orcid.org/0000-0002-9603-5966
IFOM · ITInternational Centre for Genetic Engineering and Biotechnology · ITUniversity of Trieste · ITFondazione IRCCS Istituto Neurologico Carlo Besta · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITUniversity of Padua · ITLeibniz Institute of Virology (LIV) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the RNA virus responsible for the coronavirus disease 2019 (COVID-19) pandemic. Although SARS-CoV-2 was reported to alter several cellular pathways, its impact on DNA integrity and the mechanisms involved remain unknown. Here we show that SARS-CoV-2 causes DNA damage and elicits an altered DNA damage response. Mechanistically, SARS-CoV-2 proteins ORF6 and NSP13 cause degradation of the DNA damage response kinase CHK1 through proteasome and autophagy, respectively. CHK1 loss leads to deoxynucleoside triphosphate (dNTP) shortage, causing impaired S-phase progression, DNA damage, pro-inflammatory pathways activation and cellular senescence. Supplementation of deoxynucleosides reduces that. Furthermore, SARS-CoV-2 N-protein impairs 53BP1 focal recruitment by interfering with damage-induced long non-coding RNAs, thus reducing DNA repair. Key observations are recapitulated in SARS-CoV-2-infected mice and patients with COVID-19. We propose that SARS-CoV-2, by boosting ribonucleoside triphosphate levels to promote its replication at the expense of dNTPs and by hijacking damage-induced long non-coding RNAs' biology, threatens genome integrity and causes altered DNA damage response activation, induction of inflammation and cellular senescence.

Indexed as

COVID-19AnimalsCellular SenescenceDNA DamageMicePolyphosphatesSARS-CoV-2Polyphosphatestriphosphoric acid

Identifiers

PMID36894671
PMCPMC10104783
OpenAlexW4323669765

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.