Evidence map›Paper›PMID 36891859›Full record

ArticleJournal of synchrotron radiation2023

Assessing the prospect of XAFS experiments of metalloproteins under in vivo conditions at Indus-2 synchrotron facility, India.

Debdutta Lahiri, Richa Agrawal, Khileshwari Chandravanshi, Parasmani Rajput, Ankur Agrawal, Ashutosh Dwivedi, Ravindra D Makde, S N Jha, Nandini Garg

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Article in Journal of synchrotron radiation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Debdutta LahiriHigh Pressure and Synchrotron Radiation Physics, Bhabha Atomic Research Centre, Mumbai 400085, India.
Richa AgrawalDepartment of Biochemistry and Molecular Biology, University of Chicago, 929 E 57th Street, Chicago, IL 60637, USA.
Khileshwari ChandravanshiBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.
Parasmani RajputBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.ORCID 0000-0003-0694-6756
Ankur AgrawalBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.
Ashutosh DwivediBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.
Ravindra D MakdeBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.
S N JhaBeamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai 400085, India.ORCID 0000-0002-6503-2367
Nandini GargHigh Pressure and Synchrotron Radiation Physics, Bhabha Atomic Research Centre, Mumbai 400085, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The feasibility of X-ray absorption fine-structure (XAFS) experiments of ultra-dilute metalloproteins under in vivo conditions (T = 300 K, pH = 7) at the BL-9 bending-magnet beamline (Indus-2) is reported, using as an example analogous synthetic Zn (0.1 mM) M1dr solution. The (Zn K-edge) XAFS of M1dr solution was measured with a four-element silicon drift detector. The first-shell fit was tested and found to be robust against statistical noise, generating reliable nearest-neighbor bond results. The results are found to be invariant between physiological and non-physiological conditions, which confirms the robust coordination chemistry of Zn with important biological implications. The scope of improving spectral quality for accommodation of higher-shell analysis is addressed.

Indexed as

MetalloproteinsSynchrotronsIndiaRadiographyX-RaysMetalloproteinsmetalloproteinsXAFS

Identifiers

PMID36891859
PMCPMC10000809

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