Evidence map›Paper›PMID 36889033›Full record

ArticleBiochemical and biophysical research communications2023

Quantitative analyses of interactions between SpoVG and RNA/DNA.

Timothy C Saylor, Christina R Savage, Andrew C Krusenstjerna, Nerina Jusufovic, Wolfram R Zückert, Catherine A Brissette, Md Motaleb, Paula J Schlax, Brian Stevenson

Open access · hybridAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.5field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Virulence Regulation inMicroorganisms · 2025
    Review
  5. Article
  6. Article
  7. bioRxiv : the preprint server for biology · 2024
    Article
  8. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Timothy C SaylorDepartment of Microbiology, Immunology, and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Christina R SavageDepartment of Microbiology, Immunology, and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Andrew C KrusenstjernaDepartment of Microbiology, Immunology, and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Nerina JusufovicDepartment of Microbiology, Immunology, and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Wolfram R ZückertDepartment of Microbiology, Molecular Genetics, and Immunology, University of Kansas Medical Center, Kansas City, KS, USA.
Catherine A BrissetteDepartment of Biomedical Sciences, University of North Dakota, School of Medicine and Health Sciences, Grand Forks, ND, USA.
Md MotalebDepartment of Microbiology and Immunology, East Carolina University, Greenville, NC, USA.
Paula J SchlaxDepartment of Chemistry and Biochemistry, Bates College, Lewiston, ME, USA.
Brian StevensonDepartment of Microbiology, Immunology, and Molecular Genetics, University of Kentucky, Lexington, KY, USA; Department of Entomology, University of Kentucky, Lexington, KY, USA. Electronic address: brian.stevenson@uky.edu.
University of Kentucky · USBates College · USEast Carolina University · USUniversity of Kansas Medical Center · USUniversity of North Dakota · US

Funding

SpoVG and PlzA Regulation of Lyme Disease Spirochete Infection ProcessesR01AI144126 · NIAID · UNIVERSITY OF KENTUCKY · PI STEVENSON, BRIAN · 2020 to 2023
$3.0M
NIAID NIH HHS R01 AI144126
6 · The paper itself

Abstract

The Borrelia burgdorferi SpoVG protein has previously been found to be a DNA- and RNA-binding protein. To aid in the elucidation of ligand motifs, affinities for numerous RNAs, ssDNAs, and dsDNAs were measured and compared. The loci used in the study were spoVG, glpFKD, erpAB, bb0242, flaB, and ospAB, with particular focus on the untranslated 5' portion of the mRNAs. Performing binding and competition assays yielded that the 5' end of spoVG mRNA had the highest affinity while the lowest observed affinity was to the 5' end of flaB mRNA. Mutagenesis studies of spoVG RNA and ssDNA sequences suggested that the formation of SpoVG-nucleic acid complexes are not entirely dependent on either sequence or structure. Additionally, exchanging uracil for thymine in ssDNAs did not affect protein-nucleic acid complex formation.

Indexed as

Borrelia burgdorferiRNABacterial ProteinsDNAElectrophoretic Mobility Shift AssayRNA, MessengerBacterial ProteinsDNARNARNA, MessengerBorrelia burgdorferiDNA binding proteinElectrophoretic mobility shift assay (EMSA)RNA binding proteinSpoVG

Identifiers

PMID36889033
PMCPMC11086051
OpenAlexW4322487973

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.