Evidence map›Paper›PMID 36884119›Full record

ArticleJournal of cancer research and clinical oncology2023

PLVAP protein expression correlated with microbial composition, clinicopathological features, and prognosis of patients with stomach adenocarcinoma.

Yuting Wen, Yi Wang, Yao Huang, Zhe Liu, Chan Hui

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yuting WenDepartment of Pathology, The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College, Xi'an, 710054, Shaanxi, China.
Yi WangDepartment of Pathology, The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College, Xi'an, 710054, Shaanxi, China.
Yao HuangDepartment of Oncology, The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College, No. 151, East Section of South Second Ring Road, Beilin District, Xi'an, 710054, Shaanxi, China. 234674426@qq.com.ORCID http://orcid.org/0000-0001-6692-3877
Zhe LiuDepartment of Pathology, The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College, Xi'an, 710054, Shaanxi, China.
Chan HuiDepartment of Pathology, The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College, Xi'an, 710054, Shaanxi, China.
First Affiliated Hospital of Xi'an Jiaotong University · CNSecond Affiliated Hospital of Xi'an Jiaotong University · CN

Funding

The Foundation of Xi'an science and technology project No. 21YXYJ0069The Ninth Hospital Affiliated to Xi'an Jiaotong University Medical College 2022qn02The science research project of Xi'an traditional Chinese medicine No. SZY202203
6 · The paper itself

Abstract

purposePlasmalemma vesicle-associated protein (PLVAP) is involved in many immune‑related signals; however, its role in stomach adenocarcinoma (STAD) remains to be elucidated. This study investigated PLVAP expression in tumor tissues and defined the value in STAD patients.

methodsA total of 96 patient paraffin-embedded STAD specimens and 30 paraffin-embedded adjacent non-tumor specimens from the Ninth Hospital of Xi'an were consecutively recruited in analyses. All RNA‑sequence data were available from the Cancer Genome Atlas database (TCGA). PLVAP protein expression was detected using immunohistochemistry. Microbial community analysis was performed by 16S rRNA gene sequencing using Illumina MiSeq. PLVAP mRNA expression was explored with the Tumor Immune Estimation Resource (TIMER), GEPIA, and UALCAN databases. The effect of PLVAP mRNA on prognosis was analyzed via GEPIA, and Kaplan-Meier plotter database. GeneMANIA and STRING databases were used to predict gene/protein interactions and functions. The relationships between PLVAP mRNA expression and tumor-infiltrated immune cells were analyzed via the TIMER and GEPIA databases.

resultsSignificantly elevated transcriptional and proteomic PLVAP expressions were found in STAD samples. Increased PLVAP protein and mRNA expression were significantly associated with advanced clinicopathological parameters and correlated with shorter disease-free survival (DFS) and overall survival (OS) in TCGA (P < 0.001). The microbiota in the PLVAP-rich (3+) group was significantly different from that in the PLVAP-poor (1+) group (P < 0.05). The results from TIMER showed that high PLVAP mRNA expression had significant positive correlations with CD4 + T cell (r = 0.42, P < 0.001).

conclusionPLVAP is a potential biomarker to predict the prognosis of patients with STAD, and the high level of PLVAP protein expression was closely related to bacteria. The relative abundance of Fusobacteriia was positvely associated with the level of PLVAP. In conclusion, positive staining for PLVAP was useful for predicting the poor prognosis of STAD with Fusobacteriia infection.

Indexed as

AdenocarcinomaStomach NeoplasmsHumansPrognosisProteomicsRNA, Ribosomal, 16SRNA, Ribosomal, 16SClinicopathological featuresPLVAPPrognosisStomach adenocarcinoma

Identifiers

PMID36884119
PMCPMC11798288
OpenAlexW4323533704

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.