Evidence map›Paper›PMID 36881693›Full record

ArticleBiostatistics (Oxford, England)2024

A Bayesian approach to estimating COVID-19 incidence and infection fatality rates.

Justin J Slater, Aiyush Bansal, Harlan Campbell, Jeffrey S Rosenthal, Paul Gustafson, Patrick E Brown

Abstract read
In one paragraph

Article in Biostatistics (Oxford, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Justin J SlaterDepartment of Statistical Sciences, University of Toronto, 700 University Avenue, 9th Floor Toronto, ON M5G 1Z5, Canada.
Aiyush BansalCentre for Global Health Research, St. Michael's Hospital, 30 Bond Street, Toronto, ON M5B 1W8, Canada.
Harlan CampbellDepartment of Statistics, University of British Columbia, 2207 Main Mall, Vancouver, BC V6T 1Z4, Canada.
Jeffrey S RosenthalDepartment of Statistical Sciences, University of Toronto, 700 University Avenue, 9th Floor Toronto, ON M5G 1Z5, Canada.
Paul GustafsonDepartment of Statistics, University of British Columbia, 2207 Main Mall, Vancouver, BC V6T 1Z4, Canada.ORCID 0000-0002-2375-5006
Patrick E BrownCentre for Global Health Research, St. Michael's Hospital, 30 Bond Street, Toronto, ON M5B 1W8, Canada and Department of Statistical Sciences, University of Toronto, 700 University Avenue, 9th Floor Toronto, ON M5G 1Z5, Canada.

Funding

Natural Sciences and Engineering Research Council of Canada PGSD3-559264-2021Natural Sciences and Engineering Research Council of Canada RGPIN-2017-06856Natural Sciences and Engineering Research Council of Canada Discovery RGPIN-2019-04142
6 · The paper itself

Abstract

Naive estimates of incidence and infection fatality rates (IFR) of coronavirus disease 2019 suffer from a variety of biases, many of which relate to preferential testing. This has motivated epidemiologists from around the globe to conduct serosurveys that measure the immunity of individuals by testing for the presence of SARS-CoV-2 antibodies in the blood. These quantitative measures (titer values) are then used as a proxy for previous or current infection. However, statistical methods that use this data to its full potential have yet to be developed. Previous researchers have discretized these continuous values, discarding potentially useful information. In this article, we demonstrate how multivariate mixture models can be used in combination with post-stratification to estimate cumulative incidence and IFR in an approximate Bayesian framework without discretization. In doing so, we account for uncertainty from both the estimated number of infections and incomplete deaths data to provide estimates of IFR. This method is demonstrated using data from the Action to Beat Coronavirus erosurvey in Canada.

Indexed as

COVID-19Bayes TheoremHumansIncidenceSARS-CoV-2Bayesian analysisCOVID-19Mixture modelModular inferencePost-stratification

Identifiers

PMID36881693
PMCPMC11017123

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.