Evidence map›Paper›PMID 36879153›Full record

ArticleNature structural & molecular biology2023

ATM signaling modulates cohesin behavior in meiotic prophase and proliferating cells.

Zhouliang Yu, Hyung Jun Kim, Abby F Dernburg

Open access · hybridAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  11. Cohesin organizes 3D DNA contacts surrounding active enhancers inbioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Zhouliang YuDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-7253-3848
Hyung Jun KimDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Abby F DernburgDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA. afdernburg@berkeley.edu.ORCID 0000-0001-8037-1079
QB3 · USUniversity of California, Berkeley · US

Funding

Crossover control during meiosisR01GM065591 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DERNBURG, ABBY F · 2002 to 2021
$4.5M
NIGMS NIH HHS R01 GM065591
6 · The paper itself

Abstract

Cohesins are ancient and ubiquitous regulators of chromosome architecture and function, but their diverse roles and regulation remain poorly understood. During meiosis, chromosomes are reorganized as linear arrays of chromatin loops around a cohesin axis. This unique organization underlies homolog pairing, synapsis, double-stranded break induction, and recombination. We report that axis assembly in Caenorhabditis elegans is promoted by DNA-damage response (DDR) kinases that are activated at meiotic entry, even in the absence of DNA breaks. Downregulation of the cohesin-destabilizing factor WAPL-1 by ATM-1 promotes axis association of cohesins containing the meiotic kleisins COH-3 and COH-4. ECO-1 and PDS-5 also contribute to stabilizing axis-associated meiotic cohesins. Further, our data suggest that cohesin-enriched domains that promote DNA repair in mammalian cells also depend on WAPL inhibition by ATM. Thus, DDR and Wapl seem to play conserved roles in cohesin regulation in meiotic prophase and proliferating cells.

Indexed as

Chromosomal Proteins, Non-HistoneMeiosisAnimalsCaenorhabditis elegansCell Cycle ProteinsChromosome PairingChromosomesCohesinsMammalsCell Cycle ProteinsChromosomal Proteins, Non-HistoneCohesins

Identifiers

PMID36879153
PMCPMC10113158
OpenAlexW4323320167

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.