Evidence map›Paper›PMID 36877690›Full record

ArticlePloS one2023

Transcriptomic profile comparison of monocytes from rheumatoid arthritis patients in treatment with methotrexate, anti-TNFa, abatacept or tocilizumab.

Maria Talmon, Marcella Percio, Joyce Afrakoma Obeng, Federico A Ruffinatti, Daniele Sola, Pier Paolo Sainaghi, Emanuela Bellis, Stefano Cusinato, Aurora Ianniello, Luigia G Fresu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Maria TalmonDepartment of Health Sciences, School of Medicine, University of Piemonte Orientale, Novara, Italy.
Marcella PercioDepartment of Health Sciences, School of Medicine, University of Piemonte Orientale, Novara, Italy.
Joyce Afrakoma ObengDepartment of Health Sciences, School of Medicine, University of Piemonte Orientale, Novara, Italy.
Federico A RuffinattiDepartment of Life Sciences and System Biology, University of Torino, Torino, Italy.
Daniele SolaStruttura Complessa Allergologia ed Immunologia, CAAD Ipazia, Azienda Ospedaliero-Universitaria Maggiore della Carità, Novara, Italy.
Pier Paolo SainaghiStruttura Complessa Allergologia ed Immunologia, CAAD Ipazia, Azienda Ospedaliero-Universitaria Maggiore della Carità, Novara, Italy.
Emanuela BellisDay Hospital Multidisciplinare-Struttura Complessa di Nefrologia e Dialisi, Ospedale di Borgomanero, Borgomanero, Italy.
Stefano CusinatoDay Hospital Multidisciplinare-Struttura Complessa di Nefrologia e Dialisi, Ospedale di Borgomanero, Borgomanero, Italy.
Aurora IannielloDay Hospital Multidisciplinare-Struttura Complessa di Nefrologia e Dialisi, Ospedale di Borgomanero, Borgomanero, Italy.
Luigia G FresuDepartment of Health Sciences, School of Medicine, University of Piemonte Orientale, Novara, Italy.ORCID 0000-0002-8605-9040
Università degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITPresidio Ospedaliero · ITUniversity of Turin · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is well documented that patients affected by rheumatoid arthritis (RA) have distinct susceptibility to the different biologic DMARDs available on the market, probably because of the many facets of the disease. Monocytes are deeply involved in the pathogenesis of RA and we therefore evaluated and compared the transcriptomic profile of monocytes isolated from patients on treatment with methotrexate alone or in combination with tocilizumab, anti-TNFα or abatacept and from healthy donors. Whole-genome transcriptomics yielded a list of regulated genes by Rank Product statistics and DAVID was then used for functional annotation enrichment analysis. Last, data were validated by qRT-PCR. Abatacept, tocilizumab and anti-TNFa cohorts were separately compared with methotrexate, leading to the identification of 78, 6, and 436 differentially expressed genes, respectively. The upper-most ranked genes were related to inflammatory processes and immune responses. Such an approach draws the genomic profile of monocytes in treated RA patients and lays the basis for finding gene signature for tailored therapeutic choices.

Indexed as

AbataceptArthritis, RheumatoidMethotrexateTranscriptomeTumor Necrosis Factor InhibitorsAntibodies, Monoclonal, HumanizedHumansMonocytesAbataceptAntibodies, Monoclonal, HumanizedMethotrexatetocilizumabTumor Necrosis Factor Inhibitors

Identifiers

PMID36877690
PMCPMC9987802
OpenAlexW4323294230

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.