Evidence map›Paper›PMID 36876574›Full record

ArticleEMBO reports2023

SARS-CoV-2-related bat virus behavior in human-relevant models sheds light on the origin of COVID-19.

Sarah Temmam, Xavier Montagutelli, Cécile Herate, Flora Donati, Béatrice Regnault, Mikael Attia, Eduard Baquero Salazar, Delphine Chretien, Laurine Conquet, Grégory Jouvion and 15 more

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Structural basis for mouse receptor recognition by bat SARS2-like coronaviruses.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 4 institutions in 1 country.

Sarah Temmam *Institut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris, France.ORCID 0000-0003-3655-9220
Xavier Montagutelli *Institut Pasteur, Université Paris Cité, Mouse Genetics Laboratory, Paris, France.ORCID 0000-0002-9372-5398
Cécile Herate *Center for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.
Flora Donati *Institut Pasteur, Université Paris Cité, CNRS UMR 3569, Molecular Genetics of RNA Viruses Unit, Paris, France.ORCID 0000-0003-2862-9751
Béatrice RegnaultInstitut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris, France.
Mikael AttiaInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Molecular Genetics of RNA Viruses Unit, Paris, France.
Eduard Baquero SalazarInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Structural Virology Unit, Paris, France.
Delphine ChretienInstitut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris, France.
Laurine ConquetInstitut Pasteur, Université Paris Cité, Mouse Genetics Laboratory, Paris, France.
Grégory JouvionEcole Nationale Vétérinaire d'Alfort, Unité d'Histologie et d'Anatomie Pathologique, Maisons-Alfort, France.ORCID 0000-0003-0188-2554
Juliana Pipoli Da FonsecaBiomics Platform, C2RT, Institut Pasteur, Université Paris Cité, Paris, France.
Thomas CokelaerBiomics Platform, C2RT, Institut Pasteur, Université Paris Cité, Paris, France.ORCID 0000-0001-6286-1138
Faustine AmaraInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Molecular Genetics of RNA Viruses Unit, Paris, France.
Francis RelouzatCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.ORCID 0000-0002-6387-8481
Thibaut NaninckCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.ORCID 0000-0002-6261-6412
Julien LemaitreCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.ORCID 0000-0001-6239-0110
Nathalie Derreudre-BosquetCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.
Quentin PascalCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.
Massimiliano BonomiInstitut Pasteur, Université Paris Cité, CNRS UMR 3528, Structural Bioinformatics Unit, Paris, France.ORCID 0000-0002-7321-0004
Thomas BigotInstitut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris, France.
Sandie MunierInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Molecular Genetics of RNA Viruses Unit, Paris, France.
Felix A ReyInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Structural Virology Unit, Paris, France.ORCID 0000-0002-9953-7988
Roger Le GrandCenter for Immunology of Viral, Auto-immune, Hematological and Bacterial Diseases (IMVA-HB/IDMIT), Université Paris-Saclay, Inserm, CEA, Fontenay-aux-Roses, France.ORCID 0000-0002-4928-4484
Sylvie van der WerfInstitut Pasteur, Université Paris Cité, CNRS UMR 3569, Molecular Genetics of RNA Viruses Unit, Paris, France.ORCID 0000-0002-1148-4456
Marc EloitInstitut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris, France.ORCID 0000-0002-1853-7207
Institut Pasteur · FRCentre National de la Recherche Scientifique · FRInserm · FRÉcole Nationale Vétérinaire d'Alfort · FR

Funding

Agence Nationale de la Recherche (ANR) ANR-10-INBS-09-09Agence Nationale de la Recherche (ANR) ANR-10-LABX62-IBEIDAgence Nationale de la Recherche (ANR) ANR-11-INBS-0008EC | Horizon 2020 Framework Programme (H2020) 101003589Fondation pour la Recherche Médicale (FRM) AM-CoV-PathInstitut Pasteur
6 · The paper itself

Abstract

Bat sarbecovirus BANAL-236 is highly related to SARS-CoV-2 and infects human cells, albeit lacking the furin cleavage site in its spike protein. BANAL-236 replicates efficiently and pauci-symptomatically in humanized mice and in macaques, where its tropism is enteric, strongly differing from that of SARS-CoV-2. BANAL-236 infection leads to protection against superinfection by a virulent strain. We find no evidence of antibodies recognizing bat sarbecoviruses in populations in close contact with bats in which the virus was identified, indicating that such spillover infections, if they occur, are rare. Six passages in humanized mice or in human intestinal cells, mimicking putative early spillover events, select adaptive mutations without appearance of a furin cleavage site and no change in virulence. Therefore, acquisition of a furin site in the spike protein is likely a pre-spillover event that did not occur upon replication of a SARS-CoV-2-like bat virus in humans or other animals. Other hypotheses regarding the origin of the SARS-CoV-2 should therefore be evaluated, including the presence of sarbecoviruses carrying a spike with a furin cleavage site in bats.

Indexed as

COVID-19AnimalsFurinHumansMiceMutationSARS-CoV-2Spike Glycoprotein, CoronavirusFurinSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2adaptive mutationsanimal modelbat coronaviruspathogenesisserology

Identifiers

PMID36876574
PMCPMC10074129
OpenAlexW4323294949

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.