Evidence map›Paper›PMID 36875521›Full record

ArticleFrontiers in cellular and infection microbiology2023

A trimeric coiled-coil motif binds bacterial lipopolysaccharides with picomolar affinity.

Daniel Hatlem, Mikkel Christensen, Nina K Broeker, Per E Kristiansen, Reidar Lund, Stefanie Barbirz, Dirk Linke

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Daniel HatlemInstitutt for Biovitenskap, Universitetet i Oslo, Oslo, Norway.
Mikkel ChristensenKjemisk Institutt, Universitetet i Oslo, Oslo, Norway.
Nina K BroekerDepartment Humanmedizin, HMU Health and Medical University, Potsdam, Germany.
Per E KristiansenInstitutt for Biovitenskap, Universitetet i Oslo, Oslo, Norway.
Reidar LundKjemisk Institutt, Universitetet i Oslo, Oslo, Norway.
Stefanie BarbirzDepartment Humanmedizin, HMU Health and Medical University, Potsdam, Germany.
Dirk LinkeInstitutt for Biovitenskap, Universitetet i Oslo, Oslo, Norway.
University of Oslo · NOHMU Potsdam – Health and Medical University PotsdamKjemi (Norway) · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

α-helical coiled-coils are ubiquitous protein structures in all living organisms. For decades, modified coiled-coils sequences have been used in biotechnology, vaccine development, and biochemical research to induce protein oligomerization, and form self-assembled protein scaffolds. A prominent model for the versatility of coiled-coil sequences is a peptide derived from the yeast transcription factor, GCN4. In this work, we show that its trimeric variant, GCN4-pII, binds bacterial lipopolysaccharides (LPS) from different bacterial species with picomolar affinity. LPS molecules are highly immunogenic, toxic glycolipids that comprise the outer leaflet of the outer membrane of Gram-negative bacteria. Using scattering techniques and electron microscopy, we show how GCN4-pII breaks down LPS micelles in solution. Our findings suggest that the GCN4-pII peptide and derivatives thereof could be used for novel LPS detection and removal solutions with high relevance to the production and quality control of biopharmaceuticals and other biomedical products, where even minuscule amounts of residual LPS can be lethal.

Indexed as

GlycolipidsLipopolysaccharidesProtein DomainsSaccharomyces cerevisiaeGlycolipidsLipopolysaccharidescoiled coilendotoxingram-negative bacteriaLAL assaylipopolysaccharide (LPS)outer membrane (OM)

Identifiers

PMID36875521
PMCPMC9978483
OpenAlexW4321109066

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.