Evidence map›Paper›PMID 36871012›Full record

ArticleNature communications2023

DNA replication initiation factor RECQ4 possesses a role in antagonizing DNA replication initiation.

Xiaohua Xu, Chou-Wei Chang, Min Li, Kenneth Omabe, Nhung Le, Yi-Hsuan Chen, Feng Liang, Yilun Liu

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Xiaohua XuThermo Fisher Scientific, 5781 Van Allen Way, Carlsbad, CA, 92008, USA.
Chou-Wei ChangVesigen Therapeutics, 790 Memorial Drive, Suite 103, Cambridge, MA, 02139, USA.
Min LiDepartment of Cancer Genetics and Epigenetics, Beckman Research Institute, City of Hope, Duarte, CA, 91010-3000, USA.
Kenneth Omabe *Department of Cancer Genetics and Epigenetics, Beckman Research Institute, City of Hope, Duarte, CA, 91010-3000, USA.
Nhung Le *Department of Cancer Genetics and Epigenetics, Beckman Research Institute, City of Hope, Duarte, CA, 91010-3000, USA.
Yi-Hsuan Chen *Department of Computer Science, University of Southern California, Los Angeles, CA, 90089, USA.ORCID 0000-0002-6788-4264
Feng Liang *Neuroscience Graduate Program, University of Southern California, Los Angeles, CA, 90089, USA.
Yilun LiuDepartment of Cancer Genetics and Epigenetics, Beckman Research Institute, City of Hope, Duarte, CA, 91010-3000, USA. yiliu@coh.org.ORCID 0000-0001-6884-8487
City of Hope · USUniversity of Southern California · USCity Of Hope National Medical Center · USThermo Fisher Scientific (United States) · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI John Charles Williams · 1985 to 2026
$86.3M
Regulation of Ionizing Radiation-Induced DNA Damage ResponseR01CA130899 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIU, YILUN · 2009 to 2023
$5.5M
DNA Damage Response and Oncogenic SignalingT32CA186895 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI BINGHUI SHEN, Jeremy Michael Stark · 2016 to 2026
$2.1M
RECQ5-dependent SUMO2 conjugation of PCNA in the resolution of transcription-replication conflictsR01CA225843 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI LIU, YILUN · 2019 to 2023
$2.0M
The function of Topoisomerase I SUMOylation in transcription and chemoresistanceR01GM127602 · NIGMS · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI LIU, YILUN · 2018 to 2021
$1.4M
NCI NIH HHS P30 CA033572NCI NIH HHS R01 CA130899NCI NIH HHS R01 CA225843NCI NIH HHS T32 CA186895NIGMS NIH HHS R01 GM127602
6 · The paper itself

Abstract

Deletion of the conserved C-terminus of the Rothmund-Thomson syndrome helicase RECQ4 is highly tumorigenic. However, while the RECQ4 N-terminus is known to facilitate DNA replication initiation, the function of its C-terminus remains unclear. Using an unbiased proteomic approach, we identify an interaction between the RECQ4 N-terminus and the anaphase-promoting complex/cyclosome (APC/C) on human chromatin. We further show that this interaction stabilizes APC/C co-activator CDH1 and enhances APC/C-dependent degradation of the replication inhibitor Geminin, allowing replication factors to accumulate on chromatin. In contrast, the function is blocked by the RECQ4 C-terminus, which binds to protein inhibitors of APC/C. A cancer-prone, C-terminal-deleted RECQ4 mutation increases origin firing frequency, accelerates G

Indexed as

DNA ReplicationProteomicsAnaphase-Promoting Complex-CyclosomeChromatinHumansPeptide Initiation FactorsAnaphase-Promoting Complex-CyclosomeChromatinPeptide Initiation Factors

Identifiers

PMID36871012
PMCPMC9985596
OpenAlexW4323047293

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.