Evidence map›Paper›PMID 36870432›Full record

ArticleNeuroImage2023

A joint subspace mapping between structural and functional brain connectomes.

Sanjay Ghosh, Ashish Raj, Srikantan S Nagarajan

Abstract read
In one paragraph

Article in NeuroImage, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sanjay GhoshDepartment of Radiology and Biomedical Imaging, University of California San Francisco, 513 Parnassus Ave, San Francisco, 94143, California, USA. Electronic address: sanjay.ghosh@ucsf.edu.
Ashish RajDepartment of Radiology and Biomedical Imaging, University of California San Francisco, 513 Parnassus Ave, San Francisco, 94143, California, USA. Electronic address: ashish.raj@ucsf.edu.
Srikantan S NagarajanDepartment of Radiology and Biomedical Imaging, University of California San Francisco, 513 Parnassus Ave, San Francisco, 94143, California, USA. Electronic address: srikantan.nagarajan@ucsf.edu.

Funding

Understanding disorder-specific neural pathophysiology in laryngeal dystonia and voice tremorP50DC019900 · NIDCD · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Kristina Simonyan · 2021 to 2026
$11.9M
Understanding the dynamic interactions between tau pathology and microgliamediated inflammation in Alzheimer's DiseaseR01AG072753 · NIA · WEILL MEDICAL COLL OF CORNELL UNIV · PI BUTLER, TRACY A., GUPTA, AJAY · 2021 to 2025
$5.3M
The role of the cerebellum in speechR01DC017091 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI John Francis Houde, RICHARD IVRY · 2019 to 2026
$4.5M
Dynamic Brain Imaging of Speech in Primary Progressive AphasiaR01NS100440 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MARIA LUISA GORNO TEMPINI, John Francis Houde · 2017 to 2026
$3.6M
Integrative Structural and Functional Characterization of Tip-Link Cadherins DeafnessR01DC016960 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MUELLER, ULRICH, SHAPIRO, LAWRENCE S · 2018 to 2022
$3.3M
Network Modelling of Multimodal Dynamics in Alzheimer’s Disease and DementiaRF1AG062196 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NAGARAJAN, SRIKANTAN S., RAJ, ASHISH · 2019 to 2019
$3.0M
Predictive model of spread of Parkinson's pathology using network diffusionR01NS092802 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUPTA, AJAY, RAJ, ASHISH · 2016 to 2020
$2.8M
Contribution of IL6 trans signaling in older females after ischemic strokeR01NS128412 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Anjali Chauhan · 2023 to 2026
$2.5M
Dynamic Brain Imaging of Speech in Primary Progressive AphasiaRF1NS100440 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GORNO TEMPINI, MARIA LUISA, HOUDE, JOHN FRANCIS · 2023 to 2023
$2.4M
Multimodal modeling framework for fusing structural and functional connectome dataR01EB022717 · NIBIB · WEILL MEDICAL COLL OF CORNELL UNIV · PI NAGARAJAN, SRIKANTAN S., RAJ, ASHISH · 2016 to 2018
$1.6M
Role of auditory feedback in speech motor control in Alzheimer's diseaseR01DC017696 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HOUDE, JOHN FRANCIS, NAGARAJAN, SRIKANTAN S. · 2018 to 2020
$1.5M
Understanding the dynamic interactions between tau pathology and microglia-mediated inflammation in Alzheimer's DiseaseR56AG064873 · NIA · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUPTA, AJAY, RAJ, ASHISH · 2019 to 2019
$771k
NIA NIH HHS R01 AG072753NIA NIH HHS R56 AG064873NIA NIH HHS RF1 AG062196NIBIB NIH HHS R01 EB022717NIDCD NIH HHS P50 DC019900NIDCD NIH HHS R01 DC016960NIDCD NIH HHS R01 DC017091NIDCD NIH HHS R01 DC017696NIDCD NIH HHS R56 DC019282NINDS NIH HHS R01 NS092802NINDS NIH HHS R01 NS100440NINDS NIH HHS R01 NS128412NINDS NIH HHS RF1 NS100440
6 · The paper itself

Abstract

Understanding the connection between the brain's structural connectivity and its functional connectivity is of immense interest in computational neuroscience. Although some studies have suggested that whole brain functional connectivity is shaped by the underlying structure, the rule by which anatomy constraints brain dynamics remains an open question. In this work, we introduce a computational framework that identifies a joint subspace of eigenmodes for both functional and structural connectomes. We found that a small number of those eigenmodes are sufficient to reconstruct functional connectivity from the structural connectome, thus serving as low-dimensional basis function set. We then develop an algorithm that can estimate the functional eigen spectrum in this joint space from the structural eigen spectrum. By concurrently estimating the joint eigenmodes and the functional eigen spectrum, we can reconstruct a given subject's functional connectivity from their structural connectome. We perform elaborate experiments and demonstrate that the proposed algorithm for estimating functional connectivity from the structural connectome using joint space eigenmodes gives competitive performance as compared to the existing benchmark methods with better interpretability.

Indexed as

ConnectomeAlgorithmsBrainBrain MappingHumansMagnetic Resonance ImagingNerve NetBrain connectivityEigen decompositionFunctional connectomeLaplacianStructural connectome

Identifiers

PMID36870432
PMCPMC11244732

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.