Evidence map›Paper›PMID 36864572›Full record

ArticleJournal of travel medicine2023

Development of a prediction model for the acquisition of extended spectrum beta-lactam-resistant organisms in U.S. international travellers.

David Garrett Brown, Colin J Worby, Melissa A Pender, Ben J Brintz, Edward T Ryan, Sushmita Sridhar, Elizabeth Oliver, Jason B Harris, Sarah E Turbett, Sowmya R Rao and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of travel medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 5 pooled it
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 5 syntheses or guidelines pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Review
  7. The transmission risk of multidrug-resistant organisms between hospital patients and their pets - a case-control study, Germany, 2019 to 2022.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

David Garrett BrownDivision of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID 0000-0001-8779-7048
Colin J WorbyInfectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Melissa A PenderDivision of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, UT, USA.
Ben J BrintzDivision of Epidemiology, University of Utah School of Medicine, Salt Lake City, UT, USA.
Edward T RyanHarvard Medical School, Boston, MA, USA.
Sushmita SridharHarvard Medical School, Boston, MA, USA.
Elizabeth OliverDivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Jason B HarrisDivision of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Sarah E TurbettHarvard Medical School, Boston, MA, USA.ORCID 0000-0002-3603-8110
Sowmya R RaoDepartment of Global Health, Boston University School of Public Health, Boston, MA, USA.
Ashlee M EarlInfectious Disease and Microbiome Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Regina C LaRocqueHarvard Medical School, Boston, MA, USA.
Daniel T LeungDivision of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID 0000-0001-8401-0801
Harvard University · USUniversity of Utah · USBroad Institute · USBoston University · USMassachusetts General Hospital · US

Funding

Viral Genomics: evolution, spread, and host interactionsU19AI110818 · NIAID · BROAD INSTITUTE, INC. · PI NEAFSEY, DANIEL E · 2014 to 2024
$66.5M
Utah Center for Clinical and Translational ScienceUL1TR002538 · NCATS · UNIVERSITY OF UTAH · PI HESS, RACHEL, MAJERSIK, JENNIFER JUHL · 2018 to 2022
$26.0M
Development of clinical decision tools for management of diarrhea of children in high and low resource settingsR01AI135114 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI LEUNG, DANIEL TED · 2018 to 2025
$4.0M
Training Program in Genomic MedicineT32HG008962 · NHGRI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Lynn Jorde, Aaron R Quinlan · 2016 to 2026
$3.0M
Single dose azithromycin to prevent cholera in childrenR01HD102540 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI HARRIS, JASON B · 2021 to 2025
$2.9M
ACL HHS U01CK000490CDC HHS U01CK000633NCATS NIH HHS UL1 TR002538NCEZID CDC HHS U01 CK000490NCEZID CDC HHS U01 CK000633NHGRI NIH HHS T32 HG008962NIAID NIH HHS R01 AI135114NIAID NIH HHS U19 AI110818NICHD NIH HHS R01 HD102540NIH HHS T32HG008962
6 · The paper itself

Abstract

backgroundExtended spectrum beta-lactamase producing Enterobacterales (ESBL-PE) present a risk to public health by limiting the efficacy of multiple classes of beta-lactam antibiotics against infection. International travellers may acquire these organisms and identifying individuals at high risk of acquisition could help inform clinical treatment or prevention strategies.

methodsWe used data collected from a cohort of 528 international travellers enrolled in a multicentre US-based study to derive a clinical prediction rule (CPR) to identify travellers who developed ESBL-PE colonization, defined as those with new ESBL positivity in stool upon return to the United States. To select candidate features, we used data collected from pre-travel and post-travel questionnaires, alongside destination-specific data from external sources. We utilized LASSO regression for feature selection, followed by random forest or logistic regression modelling, to derive a CPR for ESBL acquisition.

resultsA CPR using machine learning and logistic regression on 10 features has an internally cross-validated area under the receiver operating characteristic curve (cvAUC) of 0.70 (95% confidence interval 0.69-0.71). We also demonstrate that a four-feature model performs similarly to the 10-feature model, with a cvAUC of 0.68 (95% confidence interval 0.67-0.69). This model uses traveller's diarrhoea, and antibiotics as treatment, destination country waste management rankings and destination regional probabilities as predictors.

conclusionsWe demonstrate that by integrating traveller characteristics with destination-specific data, we could derive a CPR to identify those at highest risk of acquiring ESBL-PE during international travel.

Indexed as

Enterobacteriaceae InfectionsAnti-Bacterial Agentsbeta-Lactamasesbeta-LactamsEnterobacteriaceaeHumansProspective StudiesRisk FactorsAnti-Bacterial Agentsbeta-Lactamasesbeta-Lactamsantibiotic resistanceclinical predictionESBLinternational travelmachine learning

Identifiers

PMID36864572
PMCPMC10628771
OpenAlexW4323037587

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.