Evidence map›Paper›PMID 36864463›Full record

ArticleVirology journal2023

RT-PCR-based assessment of the SD Bioline Rota/Adeno Antigen-based test in infants with and without diarrhea.

Gédéon Prince Manouana, Paul Alvyn Nguema-Moure, Alexandru Tomazatos, Moustapha Nzamba Maloum, C-Thomas Bock, Peter G Kremsner, Thirumalaisamy P Velavan, Akim Ayola Adegnika, Sandra Niendorf

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Gédéon Prince ManouanaInstitute of Tropical Medicine, University of Tübingen, Tübingen, Germany. manouanacermel@gmail.com.
Paul Alvyn Nguema-MoureCentre de Recherches Médicales de Lambaréné, Lambaréné, Gabon.
Alexandru TomazatosDepartment Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Moustapha Nzamba MaloumCentre de Recherches Médicales de Lambaréné, Lambaréné, Gabon.
C-Thomas BockInstitute of Tropical Medicine, University of Tübingen, Tübingen, Germany.
Peter G KremsnerInstitute of Tropical Medicine, University of Tübingen, Tübingen, Germany.
Thirumalaisamy P VelavanInstitute of Tropical Medicine, University of Tübingen, Tübingen, Germany.
Akim Ayola Adegnika *Institute of Tropical Medicine, University of Tübingen, Tübingen, Germany.
Sandra Niendorf *Department of Infectious Diseases, Robert Koch Institute, Berlin, Germany. NiendorfS@rki.de.
Centre de Recherche Médicales de Lambaréné · GAUniversity of Tübingen · DEBernhard Nocht Institute for Tropical Medicine · DEGerman Center for Infection Research · DERobert Koch Institute · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRotavirus A (RVA) infections remain a major cause of severe acute diarrhea affecting children worldwide. To date, rapid diagnostic tests (RDT) are widely used to detect RVA. However, paediatricians question whether the RDT can still detect the virus accurately. Therefore, this study aimed to evaluate the performance of the rapid rotavirus test in comparison to the one-step RT-qPCR method.

methodsA cross-sectional study was conducted in Lambaréné, Gabon, from April 2018 to November 2019. Stool samples were collected from children under 5 years of age with diarrhoea or a history of diarrhoea within the last 24 h, and from asymptomatic children from the same communities. All stool samples were processed and analysed using the SD BIOLINE Rota/Adeno Ag RDT against a quantitative reverse transcription PCR (RT-qPCR), which is considered the gold standard.

resultsFor a total of 218 collected stool samples, the overall sensitivity of the RDT was 46.46% (confidence interval (CI) 36.38-56.77), with a specificity of 96.64% (CI 91.62-99.08) compared to one-step RT-qPCR. After confirming the presence or absence of RVA gastroenteritis, the RDT showed suitable results in detecting rotavirus A-associated disease, with a 91% concordance with the RT-qPCR. Furthermore, the performance of this test varied when correlated with seasonality, symptoms, and rotavirus genotype.

conclusionThis RDT showed high sensitivity and was suitable for the detection of RVA in patients with RVA gastroenteritis, although some asymptomatic RVA shedding was missed by RT-qPCR. It could be a useful diagnostic tool, especially in low-income countries.

Indexed as

Enterovirus InfectionsGastroenteritisRotavirusRotavirus InfectionsChildChild, PreschoolCross-Sectional StudiesDiarrheaHumansInfantReverse Transcriptase Polymerase Chain ReactionDiagnosticRotavirus ART-qPCRSD BIOLINE Rota/Adeno Ag RDT

Identifiers

PMID36864463
PMCPMC9981446
OpenAlexW4323036471

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.