Evidence map›Paper›PMID 36864087›Full record

ArticleScientific reports2023

GRB2 dimerization mediated by SH2 domain-swapping is critical for T cell signaling and cytokine production.

Aline Sandouk, Zhen Xu, Sankar Baruah, Mikaela Tremblay, Jesse B Hopkins, Srinivas Chakravarthy, Lokesh Gakhar, Nicholas J Schnicker, Jon C D Houtman

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Aline SandoukInterdisciplinary Graduate Program in Immunology, University of Iowa, Iowa City, IA, 52242, USA.
Zhen XuProtein and Crystallography Facility, University of Iowa, Iowa City, IA, 52242, USA.
Sankar BaruahProtein and Crystallography Facility, University of Iowa, Iowa City, IA, 52242, USA.
Mikaela TremblayDepartment of Microbiology and Immunology, University of Iowa, Iowa City, IA, 52242, USA.
Jesse B HopkinsBiophysics Collaborative Access Team, Argonne National Laboratory, Argonne, IL, 60439, USA.
Srinivas ChakravarthyBiophysics Collaborative Access Team, Argonne National Laboratory, Argonne, IL, 60439, USA.
Lokesh GakharProtein and Crystallography Facility, University of Iowa, Iowa City, IA, 52242, USA.
Nicholas J SchnickerProtein and Crystallography Facility, University of Iowa, Iowa City, IA, 52242, USA.
Jon C D HoutmanInterdisciplinary Graduate Program in Immunology, University of Iowa, Iowa City, IA, 52242, USA. Jon-Houtman@uiowa.edu.
University of Iowa · USArgonne National Laboratory · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Christopher K Laubenthal · 2000 to 2026
$70.0M
The Biophysics Collaborative Access Team (User Training and Outreach)P30GM138395 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI THOMAS C IRVING · 2021 to 2026
$16.5M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
Medical Scientist Training ProgramT32GM139776 · NIGMS · UNIVERSITY OF IOWA · PI Gordon F Buchanan · 2021 to 2026
$6.4M
PREDOCTORAL TRAINING PROGRAM IN IMMUNOLOGYT32AI007485 · NIAID · UNIVERSITY OF IOWA · PI Kevin L Legge · 1995 to 2026
$5.4M
Advanced Pixel Array Detector for Time-Resolved SAXS and Fiber DiffractionS10OD018090 · OD · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2014 to 2014
$529k
CD4 T cell intrinsic signaling defects during viral exhaustionR21AI157121 · NIAID · UNIVERSITY OF IOWA · PI HOUTMAN, JON C.D., VARGA, STEVEN M · 2021 to 2022
$425k
NCI NIH HHS P30 CA086862NIAID NIH HHS R21 AI157121NIAID NIH HHS T32 AI007485NIGMS NIH HHS P30 GM138395NIGMS NIH HHS T32 GM007337NIGMS NIH HHS T32 GM139776NIH HHS S10 OD018090
6 · The paper itself

Abstract

GRB2 is an adaptor protein required for facilitating cytoplasmic signaling complexes from a wide array of binding partners. GRB2 has been reported to exist in either a monomeric or dimeric state in crystal and solution. GRB2 dimers are formed by the exchange of protein segments between domains, otherwise known as "domain-swapping". Swapping has been described between SH2 and C-terminal SH3 domains in the full-length structure of GRB2 (SH2/C-SH3 domain-swapped dimer), as well as between α-helixes in isolated GRB2 SH2 domains (SH2/SH2 domain-swapped dimer). Interestingly, SH2/SH2 domain-swapping has not been observed within the full-length protein, nor have the functional influences of this novel oligomeric conformation been explored. We herein generated a model of full-length GRB2 dimer with an SH2/SH2 domain-swapped conformation supported by in-line SEC-MALS-SAXS analyses. This conformation is consistent with the previously reported truncated GRB2 SH2/SH2 domain-swapped dimer but different from the previously reported, full-length SH2/C-terminal SH3 (C-SH3) domain-swapped dimer. Our model is also validated by several novel full-length GRB2 mutants that favor either a monomeric or a dimeric state through mutations within the SH2 domain that abrogate or promote SH2/SH2 domain-swapping. GRB2 knockdown and re-expression of selected monomeric and dimeric mutants in a T cell lymphoma cell line led to notable defects in clustering of the adaptor protein LAT and IL-2 release in response to TCR stimulation. These results mirrored similarly-impaired IL-2 release in GRB2-deficient cells. These studies show that a novel dimeric GRB2 conformation with domain-swapping between SH2 domains and monomer/dimer transitions are critical for GRB2 to facilitate early signaling complexes in human T cells.

Indexed as

Interleukin-2src Homology DomainsAdaptor Proteins, Signal TransducingDimerizationGRB2 Adaptor ProteinHumansPolymersScattering, Small AngleSignal TransductionT-LymphocytesX-Ray DiffractionAdaptor Proteins, Signal TransducingGRB2 Adaptor ProteinGRB2 protein, humanInterleukin-2Polymers

Identifiers

PMID36864087
PMCPMC9981690
OpenAlexW4322760673

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.