Evidence map›Paper›PMID 36862688›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Neuron-specific transcriptomic signatures indicate neuroinflammation and altered neuronal activity in ASD temporal cortex.

Pan Zhang, Alicja Omanska, Bradley P Ander, Michael J Gandal, Boryana Stamova, Cynthia M Schumann

Open access · hybridFull text read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
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  6. Genes · 2026
    Article
  7. Transcriptomic Convergence in Autism Spectrum Disorder: Synaptic, Immune-Glial and RNA-Regulatory Axes in the Human Cerebral Cortex.International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Pan ZhangDepartment of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine, University of California, Los Angeles, CA 90095.
Alicja OmanskaDepartment of Psychiatry and Behavioral Sciences, School of Medicine, University of California, Davis, Sacramento, CA 95817.ORCID 0000-0003-0690-6949
Bradley P AnderUniversity of California, Davis, MIND Institute, Sacramento, CA 95817.
Michael J GandalSemel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA 90095.ORCID 0000-0001-5800-5128
Boryana StamovaUniversity of California, Davis, MIND Institute, Sacramento, CA 95817.ORCID 0000-0002-5440-8816
Cynthia M SchumannDepartment of Psychiatry and Behavioral Sciences, School of Medicine, University of California, Davis, Sacramento, CA 95817.
University of California, Davis · USChildren's Hospital of Philadelphia · USUniversity of California, Los Angeles · US

Funding

UCLA IDDRC: Translational CoreP50HD103557 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Peyman Golshani, SUMA JACOB · 2020 to 2026
$9.6M
Rodent Behavior CoreU54HD079125 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI VAN DE WATER, JUDY A. · 2013 to 2019
$8.5M
Typical and Pathological Cellular Development of the Human AmygdalaR01MH097236 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SCHUMANN, CYNTHIA · 2011 to 2022
$3.9M
Isoform-level probabilistic transcriptome-wide association to undercover neurogenetic mechanisms underlying complex psychiatric traitsR01MH121521 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GANDAL, MICHAEL · 2020 to 2024
$3.4M
Population-level and mechanistic dissection of 17q21 structural variant association with psychiatric traitsR01MH123922 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GANDAL, MICHAEL · 2020 to 2024
$3.1M
Cellular and developmental genetic regulation of 3' isoform diversity in the human brain and its contribution to neuropsychiatric disordersR01MH137578 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Michael Gandal, Ophir Shalem · 2024 to 2026
$2.1M
Pacific Biosciences PacBio RS Single Molecule Real Time SequencerS10OD018174 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROKHSAR, DANIEL SOLEYMAN · 2014 to 2014
$600k
Molecular alterations in primate amygdala following prenatal immune challengeR21MH119650 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BAUMAN, MELISSA DAWN, SCHUMANN, CYNTHIA · 2019 to 2020
$432k
Cell-specific molecular mechanisms underlying brain pathology in ASDR21MH108909 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SCHUMANN, CYNTHIA, STAMOVA, BORYANA · 2015 to 2016
$431k
Acquisition of LMD6000 Laser Microdissection UnitS10RR023555 · NCRR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI VAN WINKLE, LAURA S · 2008 to 2008
$244k
NCRR NIH HHS S10 RR023555NICHD NIH HHS P50 HD103557NICHD NIH HHS U54 HD079125NIH HHS S10 OD018174NIMH NIH HHS R01 MH097236NIMH NIH HHS R01 MH121521NIMH NIH HHS R01 MH123922NIMH NIH HHS R01 MH137578NIMH NIH HHS R21 MH108909NIMH NIH HHS R21 MH119650
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a highly heterogeneous disorder, yet transcriptomic profiling of bulk brain tissue has identified substantial convergence among dysregulated genes and pathways in ASD. However, this approach lacks cell-specific resolution. We performed comprehensive transcriptomic analyses on bulk tissue and laser-capture microdissected (LCM) neurons from 59 postmortem human brains (27 ASD and 32 controls) in the superior temporal gyrus (STG) of individuals ranging from 2 to 73 years of age. In bulk tissue, synaptic signaling, heat shock protein-related pathways, and RNA splicing were significantly altered in ASD. There was age-dependent dysregulation of genes involved in gamma aminobutyric acid (GABA) (

Indexed as

Autism Spectrum DisorderTranscriptomeGlutamic AcidHumansInflammationNeuroinflammatory DiseasesNeuronsGlutamic AcidASDneuron-specifictranscriptome

Identifiers

PMID36862688
PMCPMC10013873
OpenAlexW4322758817

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read14
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.