Evidence map›Paper›PMID 36861637›Full record

ArticlePlant physiology2023

Phytochromes mediate germination inhibition under red, far-red, and white light in Aethionema arabicum.

Zsuzsanna Mérai, Fei Xu, Andreas Musilek, Florian Ackerl, Sarhan Khalil, Luz Mayela Soto-Jiménez, Katarina Lalatović, Cornelia Klose, Danuše Tarkowská, Veronika Turečková and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Zsuzsanna MéraiGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Fei XuGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Andreas MusilekTechnical University of Vienna, TRIGA Center Atominstitut, Vienna 1020, Austria.
Florian AckerlGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Sarhan KhalilGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Luz Mayela Soto-JiménezGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Katarina LalatovićGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Cornelia KloseInstitute of Biology II, University of Freiburg, Freiburg D-79104, Germany.
Danuše TarkowskáLaboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic.
Veronika TurečkováLaboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic.
Miroslav StrnadLaboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic.
Ortrun Mittelsten ScheidGregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria.
Vienna Biocenter · ATGregor Mendel Institute of Molecular Plant Biology · ATPalacký University Olomouc · CZAustrian Academy of Sciences · ATCzech Academy of Sciences, Institute of Experimental Botany · CZUniversity of Freiburg · DEUniversity of Vienna · AT

Funding

Austrian Science Fund FWF I 3979
6 · The paper itself

Abstract

The view on the role of light during seed germination stems mainly from studies with Arabidopsis (Arabidopsis thaliana), where light is required to initiate this process. In contrast, white light is a strong inhibitor of germination in other plants, exemplified by accessions of Aethionema arabicum, another member of Brassicaceae. Their seeds respond to light with gene expression changes of key regulators converse to that of Arabidopsis, resulting in opposite hormone regulation and prevention of germination. However, the photoreceptors involved in this process in A. arabicum remain unknown. Here, we screened a mutant collection of A. arabicum and identified koy-1, a mutant that lost light inhibition of germination due to a deletion in the promoter of HEME OXYGENASE 1, the gene for a key enzyme in the biosynthesis of the phytochrome chromophore. koy-1 seeds were unresponsive to red- and far-red light and hyposensitive under white light. Comparison of hormone and gene expression between wild type and koy-1 revealed that very low light fluence stimulates germination, while high irradiance of red and far-red light is inhibitory, indicating a dual role of phytochromes in light-regulated seed germination. The mutation also affects the ratio between the 2 fruit morphs of A. arabicum, suggesting that light reception via phytochromes can fine-tune several parameters of propagation in adaptation to conditions in the habitat.

Indexed as

ArabidopsisArabidopsis ProteinsBrassicaceaePhytochromeGerminationHormonesSeedsArabidopsis ProteinsHormonesPhytochrome

Identifiers

PMID36861637
PMCPMC10231562
OpenAlexW4322758213

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.