Evidence map›Paper›PMID 36860143›Full record

ArticleMolecular genetics & genomic medicine2023

AXIN2-related oligodontia-colorectal cancer syndrome with cleft palate as a possible new feature.

Laura Roht, Hanne K Hyldebrandt, Astrid T Stormorken, Hilde Nordgarden, Rolf H Sijmons, Dennis K Bos, Douglas Riegert-Johnson, Sarah Mantia-Macklin, Pilvi Ilves, Kai Muru and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Laura RohtDepartment of Clinical Genetics, Genetic and Personalized Medicine Clinic, Tartu University Hospital, Tartu, Estonia.ORCID 0000-0002-5727-6759
Hanne K HyldebrandtDepartment of Medical Genetics, Oslo University Hospital, Oslo, Norway.
Astrid T StormorkenDepartment of Medical Genetics, Oslo University Hospital, Oslo, Norway.
Hilde NordgardenNorwegian National Resource Centre for Oral Health in Rare Diagnosis, Lovisenberg Diaconal Hospital, Oslo, Norway.
Rolf H SijmonsDepartment of Genetics, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Dennis K BosDepartment of Genetics, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Douglas Riegert-JohnsonDepartment of Clinical Genetics and Genomics, Mayo Clinic, Jacksonville, Florida, USA.
Sarah Mantia-MacklinDepartment of Clinical Genetics and Genomics, Mayo Clinic, Jacksonville, Florida, USA.
Pilvi IlvesDepartment of Radiology, Tartu University Hospital, Tartu, Estonia.
Kai MuruDepartment of Clinical Genetics, Genetic and Personalized Medicine Clinic, Tartu University Hospital, Tartu, Estonia.
Monica H WojcikBroad Institute of MIT and Harvard, Massachusetts, Cambridge, USA.
Tiina KahreDepartment of Clinical Genetics, Genetic and Personalized Medicine Clinic, Tartu University Hospital, Tartu, Estonia.
Katrin ÕunapDepartment of Clinical Genetics, Genetic and Personalized Medicine Clinic, Tartu University Hospital, Tartu, Estonia.ORCID 0000-0002-4594-6364
Tartu University Hospital · EEJacksonville College · USOslo University Hospital · NOUniversity Medical Center Groningen · NLBroad Institute · USLovisenberg Diakonale Høgskole · NO

Funding

Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
A powerful web-based discovery platform for rare disease geneticsR01HG009141 · NHGRI · BROAD INSTITUTE, INC. · PI QUINLAN, AARON R, REHM, HEIDI L · 2017 to 2020
$2.9M
NHGRI NIH HHS R01 HG009141NHGRI NIH HHS UM1 HG008900
6 · The paper itself

Abstract

backgroundPathogenic variants in AXIN2 have been associated with tooth agenesis, colon polyps, and colon cancer. Given the rare nature of this phenotype, we set out to collect additional genotypic and phenotypic information.

methodsData were collected via a structured questionnaire. Sequencing was performed in these patients mostly due to diagnostic purpose. A little more than half of the AXIN2 variant carriers were identified by NGS; other six were family members.

resultsHere, we report 13 individuals with a heterozygous AXIN2 pathogenic/likely pathogenic variant who have a variable expression of oligodontia-colorectal cancer syndrome (OMIM 608615) or oligodontia-cancer predisposition syndrome (ORPHA 300576). Three individuals from one family also had cleft palate, which might represent a new clinical feature of AXIN2 phenotype, also given the fact that AXIN2 polymorphisms have been found in association with oral clefting in population studies. AXIN2 has already been added to multigene cancer panel tests; further research should be conducted to determine whether it should be added to cleft lip/palate multigene panels.

conclusionMore clarity about oligodontia-colorectal cancer syndrome, about the variable expression, and associated cancer risks is needed to improve clinical management and to establish guidelines for surveillance. We collected information about the surveillance that was advised, which might support clinical management of these patients.

Indexed as

AnodontiaCleft LipCleft PalateNeoplasmsAxin ProteinColorectal NeoplasmsHumansPolymorphism, GeneticAXIN2 protein, humanAxin ProteinAXIN2cancer predisposition syndromecleft palateoligodontia

Identifiers

PMID36860143
PMCPMC10265056
OpenAlexW4322757891

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.