Evidence map›Paper›PMID 36859771›Full record

ArticleGut microbes

Secreted

Allison V Banse, Stephanie VanBeuge, T Jarrod Smith, Savannah L Logan, Karen Guillemin

Open access · goldAbstract read
In one paragraph

Article in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. DRIVERS OF VARIATION OF THE ZEBRAFISH EGG MICROBIOME.bioRxiv : the preprint server for biology · 2025
    Article
  3. Review
  4. Mucosal Hub Bacteria as Potential Targets for Improving High-Fat Diet-Related Intestinal Barrier Injury.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2024
    Article
  5. Article
  6. Unravelling the secrets of multi-domain lytic polysaccharide monooxygenases (LPMOs).Acta crystallographica. Section D, Structural biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Allison V BanseInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Stephanie VanBeugeInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
T Jarrod SmithInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Savannah L LoganDepartment of Physics, University of Oregon, Eugene, Oregon, USA.
Karen GuilleminInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.ORCID 0000-0001-6004-9955
University of Oregon · USCanadian Institute for Advanced Research · CA

Funding

Research Area IIIP50GM098911 · NIGMS · UNIVERSITY OF OREGON · PI CONERY, JOHN · 2012 to 2016
$9.8M
Live Imaging CoreP01GM125576 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 2018 to 2022
$7.8M
Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
A Zebrafish Model to Study the Role of the Microbiota in the Etiology of IntestinR01CA176579 · NCI · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 2014 to 2018
$1.5M
The role of microbial second messenger synthesis in intestinal homeostasisF32DK124033 · NIDDK · UNIVERSITY OF OREGON · PI SMITH, TIMOTHY JARROD · 2020 to 2022
$201k
NCI NIH HHS R01 CA176579NIDDK NIH HHS F32 DK124033NIGMS NIH HHS P01 GM125576NIGMS NIH HHS P50 GM098911NIGMS NIH HHS T32 GM007413
6 · The paper itself

Abstract

In response to microbiota colonization, the intestinal epithelia of many animals exhibit increased rates of cell proliferation. We used gnotobiotic larval zebrafish to identify a secreted factor from the mutualist

Indexed as

AeromonasGastrointestinal MicrobiomeAnimalsBacterial ProteinsCarrier ProteinsCell ProliferationChitinIntestinesMiceZebrafishBacterial ProteinsCarrier ProteinsChitinAeromonasGbpAGlcNAc binding proteingnotobioticintestinal epithelial proliferationlarvalmicrobiotaN-acetylglucosamineVibriozebrafish

Identifiers

PMID36859771
PMCPMC9988336
OpenAlexW4322757980

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.