ArticleNature2023
Phototrophy by antenna-containing rhodopsin pumps in aquatic environments.
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In one paragraph
Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed, 42 citations in OpenAlex.
- Phototrophicity and genomic composition in plant-associated Sphingomonas faeni strains.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026Article
- Vibronic Reorganization Suppresses Salinixanthin-to-Retinal Energy Transfer in the Freshwater Kin4B8 Xanthorhodopsin.The journal of physical chemistry letters · 2026Article
- The microbiome of marine mat-forming cyanobacteria-a microcosm of taxonomic novelty and phototrophic diversity.ISME communications · 2026Article
- Light-harvesting by antenna-containing xanthorhodopsin from an Antarctic Pseudanabaenaceae cyanobacterium.Communications biology · 2025Article
- Protonation-Enhanced Energy Transfer in Xanthorhodopsin Kin4B8.The journal of physical chemistry letters · 2025Article
- Identifying potential keystone bacterial species within the phycosphere of marine algae and unveiling their metabolic characteristics.Marine life science & technology · 2025Article
- Apusomonad rhodopsins: A new family of ultraviolet to blue light-absorbing rhodopsin channels.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Structural and spectroscopic basis of excitation energy transfer in microbial rhodopsins binding xanthophylls.Chemical science · 2025Article
- Carotenoids bind rhodopsins and act as photocycle-accelerating pigments in marine Bacteroidota.Nature microbiology · 2025Article
- Cryo-EM structure of a blue-shifted channelrhodopsin from Klebsormidium nitens.Nature communications · 2025Article
- Structural insights into light harvesting by antenna-containing rhodopsins in marine Asgard archaea.Nature microbiology · 2025Article
- Retinal to Retinal Energy Transfer in a Bistable Microbial Rhodopsin Dimer.Journal of the American Chemical Society · 2025Article
- Proteorhodopsin insights into the molecular mechanism of vectorial proton transport.Science advances · 2025Article
- Coarse-Grained Molecular Dynamics Simulations Reveal Potential Role of Cardiolipin in Lateral Organization of Proteorhodopsin.Biochemistry · 2025Article
- Actinorhodopsin: an efficient and robust light-driven proton pump for bionanotechnological applications.Scientific reports · 2025Article
- Survival strategies of planktonic organisms in alpine lakes and beyond: Baldi Memorial Award Lecture presented at the 37th Congress of the International Society of Limnology.Inland waters : journal of the International Society of Limnology · 2025Article
- Effect of Light Regime onJournal of microbiology and biotechnology · 2024Article
- Rhodopsin-based light-harvesting system for sustainable synthetic biology.Microbial biotechnology · 2024Article
- RhoMax: Computational Prediction of Rhodopsin Absorption Maxima Using Geometric Deep Learning.Journal of chemical information and modeling · 2024Article
- Crystallographic insights into lipid-membrane protein interactions in microbial rhodopsins.Frontiers in molecular biosciences · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
29 authors at 7 institutions in 4 countries.
Ariel Chazan *Faculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.
Ishita Das *Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0001-6481-7448
Takayoshi Fujiwara *Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan.
Shunya Murakoshi *Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Andrey Rozenberg *Faculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.ORCID 0000-0001-9534-2297
Ana Molina-MárquezLaboratory of Biochemistry and Molecular Biology, Faculty of Experimental Sciences, Marine International Campus of Excellence (CEIMAR), University of Huelva, Huelva, Spain.
Fumiya K SanoDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Tatsuki TanakaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Patricia Gómez-VillegasLaboratory of Biochemistry and Molecular Biology, Faculty of Experimental Sciences, Marine International Campus of Excellence (CEIMAR), University of Huelva, Huelva, Spain.ORCID 0000-0002-0511-8724
Shirley LaromFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.
Alina PushkarevFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.ORCID 0000-0002-5536-9193
Partha MalakarInstitute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
Masumi HasegawaAtmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan.
Yuya TsukamotoAtmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan.
Tomohiro IshizukaThe Institute for Solid State Physics, The University of Tokyo, Kashiwa, Japan.ORCID 0000-0002-9952-4685
Masae KonnoThe Institute for Solid State Physics, The University of Tokyo, Kashiwa, Japan.ORCID 0000-0002-0605-1816
Takashi NagataThe Institute for Solid State Physics, The University of Tokyo, Kashiwa, Japan.ORCID 0000-0001-5379-2951
Yosuke MizunoDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan.ORCID 0000-0002-4874-0679
Kota KatayamaDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan.ORCID 0000-0001-8498-4374
Rei Abe-YoshizumiDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan.
Sanford RuhmanInstitute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
Keiichi InoueThe Institute for Solid State Physics, The University of Tokyo, Kashiwa, Japan.ORCID 0000-0002-6898-4347
Hideki KandoriDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan.ORCID 0000-0002-4922-1344
Rosa LeónLaboratory of Biochemistry and Molecular Biology, Faculty of Experimental Sciences, Marine International Campus of Excellence (CEIMAR), University of Huelva, Huelva, Spain.
Wataru ShihoyaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan. tbzo8980@g.ecc.u-tokyo.ac.jp.ORCID 0000-0003-4813-5740
Susumu YoshizawaAtmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan. yoshizawa@aori.u-tokyo.ac.jp.ORCID 0000-0001-9667-6010
Mordechai ShevesDepartment of Molecular Chemistry and Materials Science, Weizmann Institute of Science, Rehovot, Israel. mudi.sheves@weizmann.ac.il.ORCID 0000-0002-5048-8169
Osamu NurekiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan. nureki@bs.s.u-tokyo.ac.jp.ORCID 0000-0003-1813-7008
Oded BéjàFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel. beja@technion.ac.il.ORCID 0000-0001-6629-0192
The University of Tokyo · JPTechnion – Israel Institute of Technology · ILNagoya Institute of Technology · JPUniversidad de Huelva · ESHebrew University of Jerusalem · ILWeizmann Institute of Science · ILJapan Agency for Marine-Earth Science and Technology · JP
Funding
No grant is acknowledged in the PubMed record.
Abstract
Energy transfer from light-harvesting ketocarotenoids to the light-driven proton pump xanthorhodopsins has been previously demonstrated in two unique cases: an extreme halophilic bacterium
Indexed as
Aquatic OrganismsPhototrophic ProcessesProton PumpsRhodopsins, MicrobialBacteriaCarotenoidsColorCyanobacteriaHeterotrophic ProcessesLakesLightLuteinMetagenomeOceans and SeasZeaxanthinsCarotenoidsLuteinproteorhodopsinProton PumpsRhodopsins, MicrobialZeaxanthins
Identifiers
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.