Evidence map›Paper›PMID 36859426›Full record

ArticleNature communications2023

Genomic attributes of Vibrio cholerae O1 responsible for 2022 massive cholera outbreak in Bangladesh.

Md Mamun Monir, Mohammad Tarequl Islam, Razib Mazumder, Dinesh Mondal, Kazi Sumaita Nahar, Marzia Sultana, Masatomo Morita, Makoto Ohnishi, Anwar Huq, Haruo Watanabe and 7 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT07685574 (Case-area Targeted Interventions), which is not on this map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT07685574 narecruitingnot on this mapstarted 2024, after this paper: background citation

Case-area Targeted Interventions (CATIs) Among Household Contacts and Neighbouring Households After Defining Cholera Hotspot Areas in Bangladesh: The Effectiveness of OCV and Potential Impact on Cholera Control

TypeinterventionalSponsorInternational Centre for Diarrhoeal Disease Research, BangladeshRan2024 to 2029Enrolled68,400ConditionsCholera, Methodology StudyArmsCholvax
3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  8. Genome-wide investigation of outbreak-associatedFrontiers in microbiology · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Lineage-specific defence systems of pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  16. Microbial genomics · 2025
    Article
  17. mSphere · 2025
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 4 countries.

Md Mamun MonirInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Mohammad Tarequl IslamInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Razib MazumderLaboratory Sciences and Services Division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Dinesh MondalLaboratory Sciences and Services Division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Kazi Sumaita NaharInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Marzia SultanaInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Masatomo MoritaDepartment of Bacteriology, National Institute of Infectious Diseases (NIID), Tokyo, Japan.ORCID 0000-0002-2850-0053
Makoto OhnishiDepartment of Bacteriology, National Institute of Infectious Diseases (NIID), Tokyo, Japan.
Anwar HuqMaryland Pathogen Research Institute, University of Maryland, College Park, MD, USA.
Haruo WatanabeDepartment of Bacteriology, National Institute of Infectious Diseases (NIID), Tokyo, Japan.
Firdausi QadriInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Mustafizur RahmanInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Nicholas ThomsonParasites and Microbes Programme, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID 0000-0002-4432-8505
Kimberley SeedDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, USA.ORCID 0000-0002-0139-1600
Rita R ColwellMaryland Pathogen Research Institute, University of Maryland, College Park, MD, USA.
Tahmeed AhmedNutrition and Clinical Services Division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh.
Munirul AlamInfectious diseases division, icddr,b (International Centre for Diarrhoeal Disease Research, Bangladesh), Dhaka, Bangladesh. munirul@icddrb.org.ORCID 0000-0001-9157-5560
International Centre for Diarrhoeal Disease Research · BDNational Institute of Infectious Diseases · JPJohns Hopkins University · USUniversity of California, Berkeley · USUniversity of London · GBUniversity of Maryland, College Park · US

Funding

EPIDEMIOLOGY &ECOLOGY OF VIBRIO CHOLERAE IN BANGLADESHR01AI039129 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SACK, DAVID A · 1996 to 2014
$15.2M
Molecular mechanisms driving the coevolution of clinical isolates of phages and epidemic Vibrio choleraeR01AI153303 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI Kimberley Diane Seed · 2020 to 2026
$4.3M
Statistical Models for AnthraxR21AI053303 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BROOKMEYER, RONALD S · 2002 to 2003
$491k
NIAID NIH HHS R01 AI039129NIAID NIH HHS R01 AI153303NIAID NIH HHS R21 AI053303Wellcome Trust
6 · The paper itself

Abstract

In 2022, one of its worst cholera outbreaks began in Bangladesh and the icddr,b Dhaka hospital treated more than 1300 patients and ca. 42,000 diarrheal cases from March-1 to April-10, 2022

Indexed as

CholeraVibrio cholerae O1BangladeshDisease OutbreaksGenomicsHumansTranscription FactorsTranscription Factors

Identifiers

PMID36859426
PMCPMC9977884
OpenAlexW4322754745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.