Evidence map›Paper›PMID 36859301›Full record

ArticlePlant methods2023

Assembly and operation of an imaging system for long-term monitoring of bioluminescent and fluorescent reporters in plants.

Maria L Sorkin, Kathleen K Markham, Stevan Zorich, Ananda Menon, Kristen N Edgeworth, Angela Ricono, Douglas Bryant, Rebecca Bart, Dmitri A Nusinow, Kathleen Greenham

Abstract read
In one paragraph

Article in Plant methods, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Maria L Sorkin *Donald Danforth Plant Science Center, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-3897-2636
Kathleen K Markham *University of Minnesota, St. Paul, MN, USA.ORCID http://orcid.org/0000-0001-8711-2213
Stevan ZorichUniversity of Minnesota, St. Paul, MN, USA.ORCID http://orcid.org/0000-0001-8717-4211
Ananda MenonUniversity of Minnesota, St. Paul, MN, USA.
Kristen N EdgeworthDonald Danforth Plant Science Center, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-4232-7330
Angela RiconoUniversity of Minnesota, St. Paul, MN, USA.
Douglas BryantDonald Danforth Plant Science Center, St. Louis, MO, USA.
Rebecca BartDonald Danforth Plant Science Center, St. Louis, MO, USA.ORCID http://orcid.org/0000-0003-1378-3481
Dmitri A NusinowDonald Danforth Plant Science Center, St. Louis, MO, USA. meter@danforthcenter.org.ORCID http://orcid.org/0000-0002-0497-1723
Kathleen GreenhamUniversity of Minnesota, St. Paul, MN, USA. greenham@umn.edu.ORCID http://orcid.org/0000-0001-7681-5263

Funding

Unraveling the molecular connections that link circadian rhythms and lipid metabolismR01GM141374 · NIGMS · UNIVERSITY OF MISSOURI-ST. LOUIS · PI WANG, XUEMIN · 2021 to 2024
$1.3M
NIGMS NIH HHS R01 GM141374NIH HHS 5R01GM141374
6 · The paper itself

Abstract

backgroundNon-invasive reporter systems are powerful tools to query physiological and transcriptional responses in organisms. For example, fluorescent and bioluminescent reporters have revolutionized cellular and organismal assays and have been used to study plant responses to abiotic and biotic stressors. Integrated, cooled charge-coupled device (CCD) camera systems have been developed to image bioluminescent and fluorescent signals in a variety of organisms; however, these integrated long-term imaging systems are expensive.

resultsWe have developed self-assembled systems for both growing and monitoring plant fluorescence and bioluminescence for long-term experiments under controlled environmental conditions. This system combines environmental growth chambers with high-sensitivity CCD cameras, multi-wavelength LEDs, open-source software, and several options for coordinating lights with imaging. This easy-to-assemble system can be used for short and long-term imaging of bioluminescent reporters, acute light-response, circadian rhythms, delayed fluorescence, and fluorescent-protein-based assays in vivo.

conclusionsWe have developed two self-assembled imaging systems that will be useful to researchers interested in continuously monitoring in vivo reporter systems in various plant species.

Indexed as

BioluminescenceFluorescenceImagingLuciferaseNon-invasiveReporter assay

Identifiers

PMID36859301
PMCPMC9976486

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.