ArticleMolecular biology and evolution2023
MitoFish, MitoAnnotator, and MiFish Pipeline: Updates in 10 Years.
Article in Molecular biology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
79 citing papers in PubMed, 146 citations in OpenAlex.
- The Complete Chromosome-Level Genome and Mitogenome Assembly ofEcology and evolution · 2026Article
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- Characterization of Three Complete Mitochondrial Genomes ofInternational journal of molecular sciences · 2026Article
- Genome Assemblies for Seven Families of Birds From the Global South.Molecular ecology resources · 2026Article
- Phylogeny of Cutthroat Trout (Evolutionary applications · 2026Article
- De novo Genome Assembly, Annotation, and Comparative Analysis of the Lined Sole Achirus lineatus as a Resource for Evolutionary and Environmental Genomics.Marine biotechnology (New York, N.Y.) · 2026Article
- Complete Mitochondrial Genomes of Two Species of the GenusAnimals : an open access journal from MDPI · 2026Article
- Hybridization, Maternal Inheritance, and Evolutionary Time of Divergence of Endangered Species ofEcology and evolution · 2026Article
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- Distribution of Aquatic Vertebrates in the Winter Dry Season Informing Water Resource Management in a Large Floodplain Lake.Biology · 2026Article
- Mitogenome Characteristics and Phylogenetic Analysis of SixAnimals : an open access journal from MDPI · 2026Article
- Exploring the mitochondrial genomes of the Indian dhole and wolf: a phylogenetic and conservation perspective.Scientific reports · 2026Article
- Characterization of the Complete Mitochondrial Genome ofBiology · 2026Article
- MitoNGS: an online platform to analyze fish metabarcoding data in high resolution.Molecular biology and evolution · 2026Article
- Mining for Mitochondria: 68 Mitogenomes for Wrasses and Parrotfishes (F: Labridae) From Off-Target UCE Data.Ecology and evolution · 2026Article
- Uncovering evolutionary and phylogenetic relationships in Glyptothorax species through comparative mitochondrial genomics.Journal, genetic engineering & biotechnology · 2026Article
- Rapid genome modifications including chromosomal fusions and large-scale inversions are key features in Arctic codfish species.Genome biology · 2026Article
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- Residual eDNA in eRNA Extracts Skews eRNA-Based Biodiversity Assessment: Call for Optimised DNase Treatment.Molecular ecology resources · 2026Article
19 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MitoFish, MitoAnnotator, and MiFish Pipeline are comprehensive databases of fish mitochondrial genomes (mitogenomes), accurate annotation software of fish mitogenomes, and a web platform for metabarcoding analysis of fish mitochondrial environmental DNA (eDNA), respectively. The MitoFish Suite currently receives over 48,000 visits worldwide every year; however, the performance and usefulness of the online platforms can still be improved. Here, we present essential updates on these platforms, including an enrichment of the reference data sets, an enhanced searching function, substantially faster genome annotation and eDNA analysis with the denoising of sequencing errors, and a multisample comparative analysis function. These updates have made our platform more intuitive, effective, and reliable. These updated platforms are freely available at http://mitofish.aori.u-tokyo.ac.jp/.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.