Evidence map›Paper›PMID 36855218›Full record

ArticleEnvironmental microbiome2023

Composition and variability of core phyllosphere fungal mycobiota on field-grown broccoli.

Min-Soo Kim, Eun-Jin Park

Abstract read
In one paragraph

Article in Environmental microbiome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Min-Soo KimDepartment of Microbiology and Molecular Biology, Chungnam National University, 99 Daehak-ro, Yuseon-gu, Daejeon, 34134, Republic of Korea. minsookim@cnu.ac.kr.
Eun-Jin ParkDepartment of Food Bioengineering, Jeju National University, 102 Jejudaehak-ro, Jeju, 63243, Republic of Korea. ejpark@jejunu.ac.kr.

Funding

Ministry of Education 2018R1D1A3B07050366Ministry of Science and ICT, Republic of Korea 2019R1C1C1009664Ministry of Science and ICT, South Korea 2020R1A5A8017671Ministry of Science and ICT, South Korea 2021R1F1A1064222
6 · The paper itself

Abstract

backgroundFresh vegetables harbor an assemblage of different microorganisms on their surfaces. The phyllosphere microbiota is important for maintaining plant health and managing crop quality before and after harvest. However, the diversity and ecology of fungal communities are largely unexplored in fresh vegetables. This study investigated the phyllosphere mycobiota of field-grown broccoli florets (n = 66) collected from 22 farms across four regions in Korea, using culturing, amplicon sequencing of the internal transcribed spacer region, and microbial network analysis.

resultsMicrobial network analysis identified core genera (Purpureocillium, Filobasidium, Cystofilobasidium, Papiliotrema, Aureobasidium, and unclassified genera of Capnodiales) specific to the broccoli phyllosphere. The composition and network complexity of core and unique populations varied among farming regions, and was associated with local agro-meteorological conditions. The complexity of microbial associations was higher in mature communities than in immature communities, but complexity was lost upon development of plant pathogenic disease. Broccoli mycobiota were classified according to the dominance of Purpurecillium. While Purpurecillium-type microbiota were prevalent in normal samples, Filobasidium-type microbiota were frequently observed in immature, damaged, or postharvest samples.

conclusionsTogether, fungal communities were important components of phyllosphere microbiota on fresh vegetables, and have substantial potential for exploitation to enhance and stabilize plant health and growth.

Indexed as

BroccoliMetagenomicsMicrobial diversityPhyllosphere mycobiotaPreharvest microbiome

Identifiers

PMID36855218
PMCPMC9976476

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.