Evidence map›Paper›PMID 36854956›Full record

ArticleNPJ biofilms and microbiomes2023

Matrix is everywhere: extracellular DNA is a link between biofilm and mineralization in Bacillus cereus planktonic lifestyle.

Lyubov A Ivanova, Vladimir V Egorov, Yana A Zabrodskaya, Aram A Shaldzhyan, Alexander Ye Baranchikov, Natalia V Tsvigun, Anna N Lykholay, Alexey D Yapryntsev, Dmitry V Lebedev, Anna A Kulminskaya

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Root colonization by beneficial rhizobacteria.FEMS microbiology reviews · 2024
    Pooled it
  2. Imaging nucleic acids in biofilms.Essays in biochemistry · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. A point mutation in aApplied and environmental microbiology · 2025
    Article
  9. Extracellular DNA-protein interactions.Current opinion in structural biology · 2024
    Review
  10. Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 1 country.

Lyubov A IvanovaPetersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", 1, mkr. Orlova roshcha, Gatchina, Leningradskaya oblast, Russia.
Vladimir V EgorovKurchatov Genome Center - PNPI, 1, mkr. Orlova roshcha, Gatchina, Leningradskaya oblast, Russia.
Yana A ZabrodskayaPeter the Great Saint Petersburg Polytechnic University, 29 Polytechnicheskaya str., St. Petersburg, 194064, Russia.ORCID 0000-0003-2012-9461
Aram A ShaldzhyanSmorodintsev Research Institute of Influenza, Russian Ministry of Health, 15/17 Prof. Popova str., St. Petersburg, 197376, Russia.
Alexander Ye BaranchikovKurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31, Leninsky av., Moscow, 119071, Russia.
Natalia V TsvigunFederal Scientific Research Center "Crystallography and Photonics" of the Russian Academy of Sciences, 59, Leninsky av., Moscow, 119333, Russia.
Anna N LykholayCentre for Molecular and Cell Technologies, Research Park of Saint-Petersburg State University, Petergof, 17, Botanicheskaya str., Saint-Petersburg, Russia.
Alexey D YapryntsevKurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31, Leninsky av., Moscow, 119071, Russia.
Dmitry V LebedevPetersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", 1, mkr. Orlova roshcha, Gatchina, Leningradskaya oblast, Russia.
Anna A KulminskayaPetersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", 1, mkr. Orlova roshcha, Gatchina, Leningradskaya oblast, Russia. kulminskaya_aa@pnpi.nrcki.ru.ORCID 0000-0002-3481-0007
Petersburg Nuclear Physics Institute · RUNS Kurnakova Institute of General and Inorganic Chemistry · RUMinistry of Health of the Russian Federation · RUPavlov Institute of Physiology of the Russian Academy of Sciences · RUPeter the Great St. Petersburg Polytechnic University · RURussian Academy of Sciences · RUSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, the mechanisms of biomineralization induced by bacterial cells in the context of biofilm formation remain the subject of intensive studies. In this study, we analyzed the influence of the medium components on the induction of CaCO

Indexed as

Bacillus cereusSemenBiofilmsCalcium CarbonateDNAHumansMaleCalcium CarbonateDNA

Identifiers

PMID36854956
PMCPMC9975174
OpenAlexW4322627174

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.