Evidence map›Paper›PMID 36851790›Full record

ArticleViruses2023

Introductions of Human-Origin Seasonal H3N2, H1N2 and Pre-2009 H1N1 Influenza Viruses to Swine in Brazil.

Caroline Tochetto, Dennis M Junqueira, Tavis K Anderson, Danielle Gava, Vanessa Haach, Mauricio E Cantão, Amy L Vincent Baker, Rejane Schaefer

Abstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  4. Passive surveillance for Influenza A virus among swine, Brazil, 2009-2023.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Caroline TochettoEmbrapa Suínos e Aves, BR 153, Km 110, Distrito de Tamanduá, Concordia 89715-899, SC, Brazil.
Dennis M JunqueiraDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Santa Maria (UFSM), Roraima Av., 1000, Santa Maria 97105-900, RS, Brazil.ORCID 0000-0003-1576-484X
Tavis K AndersonVirus and Prion Research Unit, National Animal Disease Center, United States Department of Agriculture-ARS, 1920 Dayton Av., Ames, IA 50010, USA.ORCID 0000-0002-3138-5535
Danielle GavaEmbrapa Suínos e Aves, BR 153, Km 110, Distrito de Tamanduá, Concordia 89715-899, SC, Brazil.ORCID 0000-0002-1917-2633
Vanessa HaachLaboratório de Virologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Sarmento Leite, 500, Porto Alegre 90050-170, RS, Brazil.ORCID 0000-0001-5399-4107
Mauricio E CantãoEmbrapa Suínos e Aves, BR 153, Km 110, Distrito de Tamanduá, Concordia 89715-899, SC, Brazil.
Amy L Vincent BakerVirus and Prion Research Unit, National Animal Disease Center, United States Department of Agriculture-ARS, 1920 Dayton Av., Ames, IA 50010, USA.ORCID 0000-0002-4953-7285
Rejane SchaeferEmbrapa Suínos e Aves, BR 153, Km 110, Distrito de Tamanduá, Concordia 89715-899, SC, Brazil.ORCID 0000-0002-3511-0221

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In South America, the evolutionary history of influenza A virus (IAV) in swine has been obscured by historically low levels of surveillance, and this has hampered the assessment of the zoonotic risk of emerging viruses. The extensive genetic diversity of IAV in swine observed globally has been attributed mainly to bidirectional transmission between humans and pigs. We conducted surveillance in swine in Brazil during 2011-2020 and characterized 107 H1N1, H1N2, and H3N2 IAVs. Phylogenetic analysis based on HA and NA segments revealed that human seasonal IAVs were introduced at least eight times into swine in Brazil since the mid-late 1980s. Our analyses revealed three genetic clades of H1 within the 1B lineage originated from three distinct spillover events, and an H3 lineage that has diversified into three genetic clades. The N2 segment from human seasonal H1N2 and H3N2 viruses was introduced into swine six times and a single introduction of an N1 segment from the human H1N1 virus was identified. Additional analysis revealed further reassortment with H1N1pdm09 viruses. All these introductions resulted in IAVs that apparently circulate only in Brazilian herds. These results reinforce the significant contributions of human IAVs to the genetic diversity of IAV in swine and reiterate the importance of surveillance of IAV in pigs.

Indexed as

Influenza A virusInfluenza A Virus, H1N1 SubtypeAnimalsBrazilHumansInfluenza A Virus, H1N2 SubtypeInfluenza A Virus, H3N2 SubtypePhylogenySeasonsSwinegenetic diversityinfluenza A virusreassortmentspilloversurveillanceswine

Identifiers

PMID36851790
PMCPMC9966956

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.