Evidence map›Paper›PMID 36851778›Full record

ArticleViruses2023

An Update on Eukaryotic Viruses Revived from Ancient Permafrost.

Jean-Marie Alempic, Audrey Lartigue, Artemiy E Goncharov, Guido Grosse, Jens Strauss, Alexey N Tikhonov, Alexander N Fedorov, Olivier Poirot, Matthieu Legendre, Sébastien Santini and 2 more

Abstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Host-Calibrated Time Tree Caps the Age of Giant Viruses.Molecular biology and evolution · 2025
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jean-Marie AlempicIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.
Audrey LartigueIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.
Artemiy E GoncharovDepartment of Molecular Microbiology, Institute of Experimental Medicine, Department of Epidemiology, Parasitology and Disinfectology, Northwestern State Medical Mechnikov University, Saint Petersburg 195067, Russia.ORCID 0000-0002-5206-6656
Guido GrossePermafrost Research Section, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany.ORCID 0000-0001-5895-2141
Jens StraussPermafrost Research Section, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany.
Alexey N TikhonovLaboratory of Theriology, Zoological Institute of Russian Academy of Science, Saint Petersburg 199034, Russia.
Alexander N FedorovMelnikov Permafrost Institute, Yakutsk 677010, Russia.ORCID 0000-0002-4016-2149
Olivier PoirotIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.ORCID 0000-0003-3570-7893
Matthieu LegendreIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.ORCID 0000-0002-8413-2910
Sébastien SantiniIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.ORCID 0000-0001-7087-1950
Chantal AbergelIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.ORCID 0000-0003-1875-4049
Jean-Michel ClaverieIGS, Information Génomique & Structurale (UMR7256), Institut de Microbiologie de la Méditerranée (FR 3489), Institut Microbiologie, Bioénergies et Biotechnologie, and Institut Origines, CNRS, Aix Marseille University, 13288 Marseille, France.ORCID 0000-0003-1424-0315

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One quarter of the Northern hemisphere is underlain by permanently frozen ground, referred to as permafrost. Due to climate warming, irreversibly thawing permafrost is releasing organic matter frozen for up to a million years, most of which decomposes into carbon dioxide and methane, further enhancing the greenhouse effect. Part of this organic matter also consists of revived cellular microbes (prokaryotes, unicellular eukaryotes) as well as viruses that have remained dormant since prehistorical times. While the literature abounds on descriptions of the rich and diverse prokaryotic microbiomes found in permafrost, no additional report about "live" viruses have been published since the two original studies describing pithovirus (in 2014) and mollivirus (in 2015). This wrongly suggests that such occurrences are rare and that "zombie viruses" are not a public health threat. To restore an appreciation closer to reality, we report the preliminary characterizations of 13 new viruses isolated from seven different ancient Siberian permafrost samples, one from the Lena river and one from Kamchatka cryosol. As expected from the host specificity imposed by our protocol, these viruses belong to five different clades infecting

Indexed as

AcanthamoebaPermafrostCarbon DioxideEukaryotaEukaryotic CellsCarbon DioxideAcanthamoebagiant virusKamchatkapermafrostPleistoceneSiberia

Identifiers

PMID36851778
PMCPMC9958942

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.