Evidence map›Paper›PMID 36851481›Full record

ArticleViruses2023

Genomic Analysis of West Nile Virus Lineage 1 Detected in Mosquitoes during the 2020-2021 Outbreaks in Andalusia, Spain.

María José Ruiz-López, Milagros Muñoz-Chimeno, Jordi Figuerola, Ana M Gavilán, Sarai Varona, Isabel Cuesta, Josué Martínez-de la Puente, Ángel Zaballos, Francisca Molero, Ramón C Soriguer and 3 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. West Nile virus unmasked: from gene variability to future challenges.Frontiers in cellular and infection microbiology · 2025
    Review
  7. Review
  8. Article
  9. Genomic epidemiology of West Nile virus in Europe.One health (Amsterdam, Netherlands) · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

María José Ruiz-LópezEstación Biológica de Doñana-CSIC, Avda. Américo Vespucio 26, 41092 Sevilla, Spain.ORCID 0000-0002-6849-644X
Milagros Muñoz-ChimenoCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, 28220 Madrid, Spain.
Jordi FiguerolaEstación Biológica de Doñana-CSIC, Avda. Américo Vespucio 26, 41092 Sevilla, Spain.ORCID 0000-0002-4664-9011
Ana M GavilánCIBER de Epidemiología y Salud Pública (CIBERESP), 28029 Madrid, Spain.ORCID 0000-0002-6624-2665
Sarai VaronaUnidad Bioinformática, Unidades Centrales Científico-Técnicas, Instituto de Salud Carlos III, 28220 Madrid, Spain.ORCID 0000-0002-2245-210X
Isabel CuestaUnidad Bioinformática, Unidades Centrales Científico-Técnicas, Instituto de Salud Carlos III, 28220 Madrid, Spain.
Josué Martínez-de la PuenteCIBER de Epidemiología y Salud Pública (CIBERESP), 28029 Madrid, Spain.ORCID 0000-0001-8055-4115
Ángel ZaballosUnidad Genómica, Unidades Centrales Científico-Técnicas, Instituto de Salud Carlos III, 28220 Madrid, Spain.ORCID 0000-0002-7555-5815
Francisca MoleroCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, 28220 Madrid, Spain.
Ramón C SoriguerEstación Biológica de Doñana-CSIC, Avda. Américo Vespucio 26, 41092 Sevilla, Spain.
Maria Paz Sánchez-SecoCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, 28220 Madrid, Spain.
Santiago RuizCIBER de Epidemiología y Salud Pública (CIBERESP), 28029 Madrid, Spain.
Ana VázquezCIBER de Epidemiología y Salud Pública (CIBERESP), 28029 Madrid, Spain.ORCID 0000-0002-9872-3316
Instituto de Salud Carlos III · ESEstación Biológica de Doñana · ESCentro de Investigación Biomédica en Red de Epidemiología y Salud Pública · ESUniversidad de Granada · ESUniversidad Nacional de Educación a Distancia · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Emerging infectious diseases are one of the most important global health challenges because of their impact on human and animal health. The vector-borne West Nile virus (WNV) is transmitted between birds by mosquitos, but it can also infect humans and horses causing disease. The local circulation of WNV in Spain has been known for decades, and since 2010, there have been regular outbreaks in horses, although only six cases were reported in humans until 2019. In 2020, Spain experienced a major outbreak with 77 human cases, which was followed by 6 additional cases in 2021, most of them in the Andalusian region (southern Spain). This study aimed to characterize the genomes of the WNV circulating in wild-trapped mosquitoes during 2020 and 2021 in Andalusia. We sequenced the WNV consensus genome from two mosquito pools and carried out the phylogenetic analyses. We also compared the obtained genomes with those sequenced from human samples obtained during the outbreak and the genomes obtained previously in Spain from birds (2007 and 2017), mosquitoes (2008) and horses (2010) to better understand the eco-epidemiology of WNV in Spain. As expected, the WNV genomes recovered from mosquito pools in 2020 were closely related to those recovered from humans of the same outbreak. In addition, the strain of WNV circulating in 2021 was highly related to the WNV strain that caused the 2020 outbreak, suggesting that WNV is overwintering in the area. Consequently, future outbreaks of the same strain may occur in in the future.

Indexed as

CulicidaeWest Nile virusAnimalsDisease OutbreaksGenomicsHorsesHumansMosquito VectorsPhylogenySpaincomplete genomeCulexflavivirusvector-borne diseaseszoonosis

Identifiers

PMID36851481
PMCPMC9962355
OpenAlexW4317042877

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.